Detailed information NTG0089709

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LDM85_RS02175
• Genome accession: NZ_AP024963
• Coordinates: 449944..450744 (+)
• Length: 266 a.a.
• NCBI ID: WP_223887750.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain #5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 444944..455744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDM85_RS02140 (OHP005_04450)	pseH	445438..445980 (+)	543	WP_000742586.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
LDM85_RS02145 (OHP005_04460)	-	445913..446851 (-)	939	WP_212889449.1	tetraacyldisaccharide 4'-kinase	-
LDM85_RS02150 (OHP005_04470)	-	446848..447630 (-)	783	WP_223887748.1	NAD+ synthase	-
LDM85_RS02160 (OHP005_04480)	ilvC	447879..448871 (+)	993	WP_223887749.1	ketol-acid reductoisomerase	-
LDM85_RS02165 (OHP005_04490)	minD	448896..449702 (+)	807	WP_001019097.1	septum site-determining protein MinD	-
LDM85_RS02170 (OHP005_04500)	minE	449699..449932 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
LDM85_RS02175 (OHP005_04510)	dprA	449944..450744 (+)	801	WP_223887750.1	DNA-processing protein DprA	Machinery gene
LDM85_RS02180 (OHP005_04520)	dprB	450741..451145 (+)	405	WP_000599254.1	Holliday junction resolvase RuvX	Machinery gene
LDM85_RS02185 (OHP005_04530)	-	451308..451637 (+)	330	WP_223887751.1	tetratricopeptide repeat protein	-
LDM85_RS02190 (OHP005_04540)	-	451825..452163 (+)	339	WP_015087093.1	hypothetical protein	-
LDM85_RS02195 (OHP005_04550)	-	452147..452707 (+)	561	WP_050827825.1	hypothetical protein	-
LDM85_RS02200 (OHP005_04560)	-	452718..453218 (+)	501	WP_223887752.1	glycoside hydrolase family protein	-
LDM85_RS02205	-	453238..453399 (+)	162	WP_017282730.1	hypothetical protein	-
LDM85_RS02210 (OHP005_04570)	-	453455..453652 (+)	198	WP_001869324.1	hypothetical protein	-
LDM85_RS02215	-	453740..454121 (+)	382	Protein_443	DUF1294 domain-containing protein	-
LDM85_RS02220	-	454121..454906 (+)	786	WP_223887753.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29745.59 Da
• Isoelectric Point: 8.2242

>NTDB_id=89709 LDM85_RS02175 WP_223887750.1 449944..450744(+) (dprA) [Helicobacter pylori strain #5]
MKSNFQYSVLENIPKAFDILKDPPKKLYCAGDINLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFVYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHNLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=89709 LDM85_RS02175 WP_223887750.1 449944..450744(+) (dprA) [Helicobacter pylori strain #5]
ATGAAAAGCAACTTCCAATACAGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGATCCCCCTAAAAAGCT
CTATTGTGCAGGCGATATAAATCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTGTCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTGAAAAGCGGT
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACAATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.899	85.338	0.417