Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   ABC811_RS02150 Genome accession   NZ_CP155535
Coordinates   410910..412925 (+) Length   671 a.a.
NCBI ID   WP_001048721.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 405910..417925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS02130 (ABC811_02130) - 407327..408358 (+) 1032 WP_000232209.1 3-deoxy-7-phosphoheptulonate synthase -
  ABC811_RS02135 (ABC811_02135) - 408360..409391 (+) 1032 WP_000864060.1 3-deoxy-7-phosphoheptulonate synthase -
  ABC811_RS02140 (ABC811_02140) acpS 409436..409798 (+) 363 WP_000635008.1 holo-ACP synthase -
  ABC811_RS02145 (ABC811_02145) alr 409788..410891 (+) 1104 WP_000648078.1 alanine racemase -
  ABC811_RS02150 (ABC811_02150) recG/mmsA 410910..412925 (+) 2016 WP_001048721.1 ATP-dependent DNA helicase RecG Machinery gene
  ABC811_RS02155 (ABC811_02155) - 413241..414221 (+) 981 WP_000795116.1 acetylxylan esterase -
  ABC811_RS02160 (ABC811_02160) - 415026..415253 (+) 228 WP_000576349.1 hypothetical protein -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75317.00 Da        Isoelectric Point: 6.0675

>NTDB_id=897015 ABC811_RS02150 WP_001048721.1 410910..412925(+) (recG/mmsA) [Streptococcus pneumoniae strain PJ755/1]
MNLHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKIKQVLELEDGEKAVLSGQVVTPASVQYYGFKRNRLR
FSLKQGEVVFAVNFFNQPYLADKIELGATLAVFGKWDRAKASLTGMKVLAQVEDDLQPVYRLAQGISQASLVKVIKTAFD
QGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEYKQALRRIKFEELFYFQMQLQMLKSENRVQGSGLVLNWSQE
KVTAVKVSLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQAALMVPTEILAEQHFES
LQNLFPNLKLALLTGSLKAAEKREVLETIAKGEADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREKGDNPD
VLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIKHEQLPQVLTWLEGEIQKGSQAYVISPLIEESEALDLKN
AIALSEELTTHFAGKAEVALLHGRMKSDEKDQIMQDFKERKTDILVSTTVIEVGVNVPNATVMIIMDADRFGLSQLHQLR
GRVGRGDKQSYAVLVANPKTDSGKDRMRIMTETTNGFVLAEEDLKMRGSGEIFGTRQSGLPEFQVADIIEDFPILEEARK
VASYISSIEAWQEDPEWRMIALHLEKKEHLD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=897015 ABC811_RS02150 WP_001048721.1 410910..412925(+) (recG/mmsA) [Streptococcus pneumoniae strain PJ755/1]
ATGAATCTACATCAACCCTTGCATGTCTTGCCTGGTGTGGGACCAAAGTCAGCAGAAAAATACGCCAAACTAGGAATTGA
AAACTTGCAAGATCTCTTGCTCTACTTTCCTTTCCGTTATGAAGACTTCAAAATCAAGCAGGTGCTGGAGCTGGAAGACG
GTGAGAAGGCAGTTCTTTCTGGTCAGGTAGTGACTCCTGCTAGTGTCCAGTATTATGGTTTCAAGCGCAATCGCCTGCGT
TTTAGTCTCAAGCAGGGAGAGGTCGTTTTTGCGGTGAATTTCTTTAACCAGCCCTATCTGGCTGATAAAATAGAGTTGGG
AGCAACCCTTGCTGTCTTTGGAAAATGGGACCGCGCTAAGGCTAGTCTGACTGGGATGAAGGTTCTGGCTCAGGTAGAAG
ATGACCTCCAGCCTGTCTATCGTCTGGCTCAGGGAATCAGTCAGGCCAGTCTGGTTAAGGTCATCAAGACGGCTTTTGAT
CAGGGACTGGACCTCTTGATAGAAGAAAATCTGCCCCAGTCTTTACTAGACAAATACAAACTCATGTCCCGTTGTCAGGC
AGTCCGAGCTATGCATTTTCCAAAGGATTTGGCAGAATACAAGCAGGCTCTTCGCCGTATCAAGTTTGAGGAACTCTTTT
ATTTCCAAATGCAGCTGCAGATGCTCAAGTCTGAAAATAGAGTTCAGGGAAGTGGTCTGGTTCTGAATTGGTCTCAGGAA
AAAGTGACAGCAGTTAAAGTAAGTCTTCCTTTTGCCCTGACCCAAGCTCAGGAAAAGAGTTTGCAGGAAATTTTAACTGA
TATGAAGTCCGACCACCACATGAATCGTCTCCTACAAGGGGATGTGGGGAGTGGAAAAACGGTAGTCGCTGGCTTGGCCA
TGTTTGCGGCAGTGACAGCAGGTTATCAGGCTGCCCTAATGGTACCAACAGAAATCCTCGCAGAGCAACACTTTGAGAGT
TTACAGAACCTTTTTCCCAATTTGAAACTGGCTCTCTTGACAGGTTCCTTGAAAGCTGCAGAAAAGAGAGAGGTCTTGGA
GACCATTGCCAAGGGTGAGGCTGATTTGATTATCGGAACTCACGCTCTGATACAAGATGGGGTGGAGTATGCTCGTCTTG
GTTTGATTATTATCGATGAGCAGCACCGTTTTGGTGTAGGGCAAAGGCGTATTTTACGGGAAAAAGGTGACAATCCAGAT
GTCCTCATGATGACGGCGACTCCCATTCCACGGACGCTTGCCATCACAGCCTTTGGAGATATGGATGTTTCCATTATCGA
CCAGATGCCAGCAGGTCGGAAGCCTATTGTGACGCGCTGGATCAAACATGAGCAACTACCTCAGGTCTTGACTTGGTTAG
AGGGGGAAATTCAAAAAGGTTCCCAAGCCTATGTCATCTCTCCTTTGATTGAAGAATCAGAAGCTCTAGATTTGAAAAAT
GCCATTGCCTTATCAGAGGAGTTGACGACTCATTTTGCAGGCAAGGCAGAGGTGGCTCTTCTACATGGTAGGATGAAGAG
TGACGAAAAAGACCAGATCATGCAGGATTTCAAGGAGAGAAAGACGGATATTCTGGTTTCGACGACGGTTATTGAGGTTG
GGGTCAACGTTCCCAATGCGACTGTCATGATTATCATGGATGCCGATCGCTTCGGTCTCAGTCAACTTCACCAGCTTAGA
GGTCGTGTCGGTCGGGGGGACAAGCAGTCCTACGCTGTTCTCGTTGCCAATCCCAAGACGGATTCTGGGAAAGACCGCAT
GCGTATCATGACAGAAACGACCAATGGATTTGTCCTTGCGGAGGAAGATTTGAAAATGCGTGGTTCTGGTGAGATTTTTG
GAACCAGACAGTCAGGACTTCCAGAGTTCCAAGTGGCTGATATTATCGAAGATTTTCCGATTTTAGAAGAAGCAAGAAAG
GTTGCTAGCTACATTAGTTCTATAGAAGCTTGGCAAGAAGATCCAGAGTGGCGCATGATTGCCCTTCATCTGGAAAAGAA
AGAACATCTGGATTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(456-566)

RecG wedge domain (RecG_wedge)

(11-158)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-665)

DEAD/DEAH box helicase (DEAD)

(254-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

99.404

100

0.994
  recG/mmsA Streptococcus pneumoniae R36A

99.404

100

0.994
  recG Bacillus subtilis subsp. subtilis str. 168

49.115

100

0.496
  recG Neisseria meningitidis strain C311

38.839

100

0.389