Detailed information NTG0089691

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LDM86_RS02160
• Genome accession: NZ_AP024962
• Coordinates: 445796..446596 (+)
• Length: 266 a.a.
• NCBI ID: WP_223889394.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain #3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 440796..451596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDM86_RS02125 (OHP003_04370)	pseH	441297..441839 (+)	543	WP_140486594.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
LDM86_RS02130 (OHP003_04380)	-	441772..442710 (-)	939	WP_223889391.1	tetraacyldisaccharide 4'-kinase	-
LDM86_RS02135 (OHP003_04390)	-	442707..443489 (-)	783	WP_223889392.1	NAD+ synthase	-
LDM86_RS02145 (OHP003_04400)	ilvC	443737..444729 (+)	993	WP_223889393.1	ketol-acid reductoisomerase	-
LDM86_RS02150 (OHP003_04410)	minD	444748..445554 (+)	807	WP_120944752.1	septum site-determining protein MinD	-
LDM86_RS02155 (OHP003_04420)	minE	445551..445784 (+)	234	WP_000051412.1	cell division topological specificity factor MinE	-
LDM86_RS02160 (OHP003_04430)	dprA	445796..446596 (+)	801	WP_223889394.1	DNA-processing protein DprA	Machinery gene
LDM86_RS02165 (OHP003_04440)	dprB	446593..446997 (+)	405	WP_223889395.1	Holliday junction resolvase RuvX	Machinery gene
LDM86_RS02170 (OHP003_04450)	-	447108..447749 (+)	642	WP_407057707.1	tetratricopeptide repeat protein	-
LDM86_RS07760 (OHP003_04460)	-	447789..447977 (+)	189	WP_407057705.1	hypothetical protein	-
LDM86_RS02175 (OHP003_04470)	-	448109..448447 (+)	339	WP_017283991.1	hypothetical protein	-
LDM86_RS02180 (OHP003_04480)	-	448431..448991 (+)	561	WP_223889396.1	hypothetical protein	-
LDM86_RS02185 (OHP003_04490)	-	449002..449496 (+)	495	WP_223889397.1	glycoside hydrolase family protein	-
LDM86_RS02190	-	449516..449677 (+)	162	WP_223889398.1	lysozyme	-
LDM86_RS07705	-	449727..449852 (+)	126	WP_317983374.1	hypothetical protein	-
LDM86_RS02195	-	450009..450390 (+)	382	Protein_435	DUF1294 domain-containing protein	-
LDM86_RS02200	-	450390..451175 (+)	786	WP_223889399.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29797.71 Da
• Isoelectric Point: 8.2306

>NTDB_id=89691 LDM86_RS02160 WP_223889394.1 445796..446596(+) (dprA) [Helicobacter pylori strain #3]
MKSNFQYSALEDIPKAFDILKDPPKKLYCVGDIKLLDVPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFVYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=89691 LDM86_RS02160 WP_223889394.1 445796..446596(+) (dprA) [Helicobacter pylori strain #3]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGGATATCCCTAAAGCTTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTCTAGATGTGCCTTTAAAAGTGGCTATTATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTGTCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAACTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAATACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41