Detailed information NTG0896847

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ABC814_RS09915
• Genome accession: NZ_CP155533
• Coordinates: 1917866..1918765 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904851.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Spn1439-106
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1912866..1923765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC814_RS09890 (ABC814_09890)	rsmA	1913091..1913963 (-)	873	WP_001216863.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
ABC814_RS09895 (ABC814_09895)	-	1914214..1914507 (-)	294	WP_000333250.1	hypothetical protein	-
ABC814_RS09900 (ABC814_09900)	-	1914500..1915141 (-)	642	WP_000565524.1	ABC transporter ATP-binding protein	-
ABC814_RS09905 (ABC814_09905)	-	1915143..1917173 (-)	2031	WP_179130649.1	bacteriocin-associated integral membrane family protein	-
ABC814_RS09910 (ABC814_09910)	-	1917250..1917546 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
ABC814_RS09915 (ABC814_09915)	comR	1917866..1918765 (-)	900	WP_000904851.1	helix-turn-helix transcriptional regulator	Regulator
ABC814_RS09920 (ABC814_09920)	rnmV	1918837..1919397 (-)	561	WP_000660013.1	ribonuclease M5	-
ABC814_RS09925 (ABC814_09925)	-	1919397..1920170 (-)	774	WP_000575634.1	TatD family hydrolase	-
ABC814_RS09930 (ABC814_09930)	-	1920476..1921228 (-)	753	WP_350337565.1	DUF1542 domain-containing protein	-
ABC814_RS09935 (ABC814_09935)	rpmH	1921404..1921538 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
ABC814_RS09940 (ABC814_09940)	-	1921683..1922897 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
ABC814_RS09945 (ABC814_09945)	-	1923053..1923346 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35245.13 Da
• Isoelectric Point: 5.0777

>NTDB_id=896847 ABC814_RS09915 WP_000904851.1 1917866..1918765(-) (comR) [Streptococcus pneumoniae strain Spn1439-106]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILGEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=896847 ABC814_RS09915 WP_000904851.1 1917866..1918765(-) (comR) [Streptococcus pneumoniae strain Spn1439-106]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGGGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361