Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   R4700_RS03965 Genome accession   NZ_CP137112
Coordinates   766213..766833 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain 02H2025     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 761213..771833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4700_RS03940 recA 761590..762756 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  R4700_RS03945 cinA 762811..764067 (-) 1257 WP_000642709.1 competence/damage-inducible protein A Machinery gene
  R4700_RS03950 brpA 764152..765168 (-) 1017 WP_000239282.1 biofilm formation/cell division transcriptional regulator BrpA -
  R4700_RS03955 - 765176..765694 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  R4700_RS03960 tsaE 765684..766127 (-) 444 WP_000275589.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  R4700_RS03965 comM 766213..766833 (-) 621 WP_000839908.1 hypothetical protein Regulator
  R4700_RS03970 - 767216..768079 (-) 864 Protein_768 helix-turn-helix domain-containing protein -
  R4700_RS03975 - 768425..770440 (+) 2016 WP_033705590.1 DUF1430 domain-containing protein -
  R4700_RS03980 - 770442..771074 (+) 633 WP_000571419.1 ABC transporter ATP-binding protein -
  R4700_RS03985 - 771215..771493 (+) 279 WP_000712962.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=896018 R4700_RS03965 WP_000839908.1 766213..766833(-) (comM) [Streptococcus pneumoniae strain 02H2025]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=896018 R4700_RS03965 WP_000839908.1 766213..766833(-) (comM) [Streptococcus pneumoniae strain 02H2025]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369