Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ABC966_RS09285 Genome accession   NZ_CP155062
Coordinates   1935156..1935974 (-) Length   272 a.a.
NCBI ID   WP_001124431.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CC130-MRSA-XI     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1930156..1940974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC966_RS09265 (ABC966_09265) - 1931249..1932226 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  ABC966_RS09270 (ABC966_09270) - 1932487..1933323 (-) 837 WP_000886457.1 membrane protein -
  ABC966_RS09275 (ABC966_09275) - 1933332..1934849 (-) 1518 WP_000535832.1 ABC transporter ATP-binding protein -
  ABC966_RS09280 (ABC966_09280) - 1934864..1935178 (-) 315 WP_000435806.1 YfhH family protein -
  ABC966_RS09285 (ABC966_09285) recX 1935156..1935974 (-) 819 WP_001124431.1 recombination regulator RecX Regulator
  ABC966_RS09290 (ABC966_09290) sgtB 1936235..1937043 (-) 809 Protein_1789 monofunctional peptidoglycan glycosyltransferase SgtB -
  ABC966_RS09295 (ABC966_09295) - 1937301..1938817 (+) 1517 WP_103143326.1 IS3-like element ISSau2 family transposase -
  ABC966_RS09300 (ABC966_09300) - 1938986..1939501 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  ABC966_RS09305 (ABC966_09305) - 1939631..1939792 (-) 162 WP_001005407.1 SE1561 family protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32258.11 Da        Isoelectric Point: 6.3167

>NTDB_id=895864 ABC966_RS09285 WP_001124431.1 1935156..1935974(-) (recX) [Staphylococcus aureus strain CC130-MRSA-XI]
MPKITKIEVQKKNKERFNLFLDQQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=895864 ABC966_RS09285 WP_001124431.1 1935156..1935974(-) (recX) [Staphylococcus aureus strain CC130-MRSA-XI]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACCAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993