Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   R4699_RS10545 Genome accession   NZ_CP137105
Coordinates   2084665..2085675 (+) Length   336 a.a.
NCBI ID   WP_000990607.1    Uniprot ID   A0A0B7LZL8
Organism   Streptococcus pneumoniae strain 16H2092     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2079665..2090675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4699_RS10515 - 2080536..2080742 (+) 207 Protein_2033 hypothetical protein -
  R4699_RS10520 - 2080739..2080933 (+) 195 WP_000820187.1 hypothetical protein -
  R4699_RS10525 - 2080920..2081804 (+) 885 WP_000219347.1 ABC transporter ATP-binding protein -
  R4699_RS10530 - 2081806..2082543 (+) 738 WP_050104940.1 ABC transporter permease -
  R4699_RS10535 - 2082543..2083640 (+) 1098 WP_000893498.1 sensor histidine kinase -
  R4699_RS10540 - 2083641..2084240 (+) 600 WP_000866702.1 response regulator transcription factor -
  R4699_RS10545 ccpA 2084665..2085675 (+) 1011 WP_000990607.1 catabolite control protein A Regulator
  R4699_RS10550 - 2085739..2086110 (+) 372 WP_057529614.1 hypothetical protein -
  R4699_RS10555 - 2086107..2087069 (-) 963 WP_001124777.1 asparaginase -
  R4699_RS10560 - 2087135..2088523 (+) 1389 WP_050104942.1 Cof-type HAD-IIB family hydrolase -
  R4699_RS10565 - 2088558..2089010 (-) 453 WP_000079154.1 universal stress protein -
  R4699_RS10570 - 2089172..2089466 (+) 295 Protein_2044 hypothetical protein -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37073.01 Da        Isoelectric Point: 5.3212

>NTDB_id=895522 R4699_RS10545 WP_000990607.1 2084665..2085675(+) (ccpA) [Streptococcus pneumoniae strain 16H2092]
MNADDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
SLAKGIDDIAEMYKYNIVLANSDEDNEKEVSVVNTLFSKQVDGIIYMGYHLTDKIRSEFSRSRTPIVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLAKENERIAFVSGPLVDDINGKVRLVGYKETLKKAGITYSEGLVFESKYSYDDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERSSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=895522 R4699_RS10545 WP_000990607.1 2084665..2085675(+) (ccpA) [Streptococcus pneumoniae strain 16H2092]
ATGAATGCAGATGATACAGTAACCATTTATGATGTCGCTCGTGAAGCAGGTGTTTCCATGGCGACGGTCAGCCGTGTGGT
CAATGGCAATAAAAATGTAAAAGAGAATACCCGTAAAAAAGTGCTAGAGGTAATTGATCGTTTGGATTATCGTCCAAATG
CAGTTGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTCGTGATTCCAAATATTACCAATGGTTATTTTTCG
AGTTTGGCTAAGGGGATTGATGATATTGCAGAAATGTACAAGTACAATATTGTCCTAGCTAATAGCGATGAAGATAACGA
GAAAGAAGTTTCTGTTGTCAATACCCTCTTTTCAAAGCAGGTAGATGGCATTATCTATATGGGGTATCACTTGACAGATA
AAATTCGCTCAGAATTTTCGCGTTCACGTACTCCGATTGTTCTCGCAGGAACTGTCGATGTTGAGCACCAGTTGCCAAGT
GTCAATATTGACTATAAGCAAGCAACAATTGATGCAGTGAGTTACCTTGCTAAAGAAAATGAGCGTATTGCTTTCGTTAG
CGGTCCGCTAGTGGATGACATCAATGGTAAGGTTCGTTTAGTTGGCTACAAGGAAACCTTGAAAAAAGCAGGAATCACTT
ATAGTGAGGGTTTGGTATTTGAATCTAAATATAGCTATGATGATGGTTACGCCTTAGCAGAGCGTTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAGTTGGCAGCAGGAGTCTTGAACGGTTTGGCTGATAAGGGTGTTTCTGTGCC
AGAAGATTTTGAAATTATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACGATTGCCCAAC
CTCTTTATGACCTTGGTGCCATTAGTATGCGTATGTTGACCAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTAGCTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LZL8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

99.702

100

0.997

  ccpA Streptococcus gordonii str. Challis substr. CH1

87.126

99.405

0.866

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568