Detailed information NTG0895279

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: R4709_RS07440
• Genome accession: NZ_CP137102
• Coordinates: 1424410..1425906 (+)
• Length: 498 a.a.
• NCBI ID: WP_000759907.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16H3071-2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1419410..1430906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4709_RS07430	-	1420485..1421678 (+)	1194	WP_000835622.1	O-antigen ligase	-
R4709_RS07435	amiA3	1422364..1424343 (+)	1980	WP_000742233.1	peptide ABC transporter substrate-binding protein	Regulator
R4709_RS07440	amiC	1424410..1425906 (+)	1497	WP_000759907.1	ABC transporter permease	Regulator
R4709_RS07445	amiD	1425906..1426832 (+)	927	WP_000103700.1	oligopeptide ABC transporter permease OppC	Regulator
R4709_RS07450	amiE	1426841..1427908 (+)	1068	WP_000159554.1	ABC transporter ATP-binding protein	Regulator
R4709_RS07455	amiF	1427919..1428845 (+)	927	WP_001291293.1	ATP-binding cassette domain-containing protein	Regulator
R4709_RS07460	-	1429464..1430273 (+)	810	Protein_1424	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 55671.21 Da
• Isoelectric Point: 9.4436

>NTDB_id=895279 R4709_RS07440 WP_000759907.1 1424410..1425906(+) (amiC) [Streptococcus pneumoniae strain 16H3071-2]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTLVPRKLIFKQDPNYNKIATTADKRDNYENTVFERMGYIEYYDTKELQEKAS
SMDSSVTVEANATNKAIYEKYINQLGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDSAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNLNLGDSYPTYANTPVLQVITQGQGQTKTAQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVASYGKDDPYTATESNYQYPSMIVSSAITGLIGLVLAYALAVPLGSAMARFKNTWIDSLSTGT
LTFLLALPTIALVYIVRLIGSSIALPDSFPILGAGDWRSYVLPAVILGLLGAPVTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAIIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSRLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide

• Length: 1497 bp

>NTDB_id=895279 R4709_RS07440 WP_000759907.1 1424410..1425906(+) (amiC) [Streptococcus pneumoniae strain 16H3071-2]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCGATTTTCTTAGTAACGACTTTGACCTACACGATTAT
CTATACCTTGGTTCCTCGAAAATTGATTTTCAAGCAGGATCCTAACTATAATAAAATTGCGACAACGGCTGATAAACGTG
ATAACTATGAAAATACTGTGTTTGAGCGTATGGGCTACATTGAGTATTACGATACTAAAGAGTTGCAAGAAAAGGCAAGT
AGCATGGATTCTTCTGTAACAGTAGAAGCAAATGCGACCAATAAAGCTATTTATGAAAAGTACATCAATCAATTAGGTCA
TGGTTGGACTTTGGGAGAATTTACTGAAAGTGGTCAATTCTATGCTACTCGTGAAATTCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGACCATACAAATAAAATCCAAGACCCTGAAAATCCAGACTTGAAACGCTACCTT
CGTTTTGAAAATGATTCAGCTATCGGATGGTCATTGGTCGGTTCAGGAACTAAACATAAATATCTCTTGTACTTTAACAG
TCAGTTCCCATTTGTTCATCAAAACTTTGTGAACTTGAATTTAGGTGACTCTTACCCAACCTATGCTAATACACCAGTTC
TTCAGGTTATTACTCAAGGTCAAGGACAAACCAAAACTGCCCAAGTTCAGTTCCCAACAGGTAAGAAAACGTCTTCTGTA
AATATTTACTCAAGAACCTACAAGTCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAGCTATGGGAAAGATGATCCTTA
TACAGCGACTGAAAGTAATTACCAATATCCATCTATGATTGTCAGCTCTGCTATTACTGGTTTGATTGGTTTGGTTCTTG
CCTATGCTCTTGCCGTGCCACTTGGTTCAGCCATGGCTCGTTTCAAGAACACTTGGATTGATAGCCTCTCAACAGGGACT
TTGACCTTCTTGCTTGCTCTTCCAACGATTGCCTTGGTTTACATCGTTCGATTGATTGGATCATCTATTGCCCTTCCAGA
TTCATTCCCTATCTTGGGAGCTGGAGATTGGCGTTCTTACGTTTTACCAGCAGTCATCCTTGGTTTGTTGGGTGCTCCTG
TTACAGCCATTTGGATTCGTCGTTACATGATTGACTTGCAATCTCAAGACTTTGTTCGTTTCGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACACATCTTTAAAAATGCCATGGTTCCGCTGGTTTCAGGAATTCCTGGTGCCATTAT
TGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTTGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACGTCTTTTGGGAGAT
ATTTGGATGACTATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	76.707	100	0.767
amiC	Streptococcus thermophilus LMG 18311	76.506	100	0.765
amiC	Streptococcus thermophilus LMD-9	76.104	100	0.761