Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | R4709_RS02725 | Genome accession | NZ_CP137102 |
| Coordinates | 541814..541978 (+) | Length | 54 a.a. |
| NCBI ID | WP_306420852.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain 16H3071-2 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 536814..546978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R4709_RS02685 | - | 537325..537728 (-) | 404 | Protein_534 | immunity protein | - |
| R4709_RS02690 | - | 537725..537889 (-) | 165 | WP_000727118.1 | hypothetical protein | - |
| R4709_RS02695 | - | 538186..538305 (-) | 120 | WP_050233614.1 | PncF family bacteriocin immunity protein | - |
| R4709_RS02700 | blpU | 538308..538538 (-) | 231 | WP_050243503.1 | bacteriocin-like peptide BlpU | - |
| R4709_RS02705 | blpJ | 538607..538876 (-) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| R4709_RS02710 | blpI | 539343..539540 (-) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| R4709_RS02715 | comA/nlmT | 539822..540409 (+) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| R4709_RS02720 | blpA | 540336..541604 (+) | 1269 | Protein_541 | peptide cleavage/export ABC transporter BlpA | - |
| R4709_RS02725 | comA/nlmT | 541814..541978 (+) | 165 | WP_306420852.1 | hypothetical protein | Regulator |
| R4709_RS02730 | - | 541989..543350 (+) | 1362 | WP_050233594.1 | bacteriocin secretion accessory protein | - |
| R4709_RS02735 | blpC | 543407..543562 (+) | 156 | WP_000358811.1 | quorum-sensing system pheromone BlpC | - |
| R4709_RS02740 | - | 543606..544946 (-) | 1341 | WP_001099893.1 | sensor histidine kinase | - |
| R4709_RS02745 | comE/blpR | 544960..545697 (-) | 738 | WP_001219137.1 | LytTR family DNA-binding domain-containing protein | Regulator |
| R4709_RS02750 | - | 545702..546040 (-) | 339 | WP_317803430.1 | LytTR family DNA-binding domain-containing protein | - |
| R4709_RS02755 | - | 546317..546646 (+) | 330 | WP_000132572.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 54 a.a. Molecular weight: 6235.24 Da Isoelectric Point: 8.7682
>NTDB_id=895233 R4709_RS02725 WP_306420852.1 541814..541978(+) (comA/nlmT) [Streptococcus pneumoniae strain 16H3071-2]
MSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
MSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
Nucleotide
Download Length: 165 bp
>NTDB_id=895233 R4709_RS02725 WP_306420852.1 541814..541978(+) (comA/nlmT) [Streptococcus pneumoniae strain 16H3071-2]
ATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACTAACCGTGTCATTGTTCT
TGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGCAAGGATTCTACCATCATCTATTCAATA
AATAA
ATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGCCGAACGAACTAACCGTGTCATTGTTCT
TGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGCAAGGATTCTACCATCATCTATTCAATA
AATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
64.151 |
98.148 |
0.63 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
67.347 |
90.741 |
0.611 |
| comA | Streptococcus mitis NCTC 12261 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae TIGR4 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae Rx1 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae D39 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus pneumoniae R6 |
63.265 |
90.741 |
0.574 |
| comA | Streptococcus mitis SK321 |
61.224 |
90.741 |
0.556 |
| rcrQ | Streptococcus mutans UA159 |
43.75 |
88.889 |
0.389 |