Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AAVB50_RS01075 Genome accession   NZ_CP154923
Coordinates   160680..161474 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain FUA2233     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 155680..166474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVB50_RS01055 (AAVB50_01055) walR 155922..156629 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  AAVB50_RS01060 (AAVB50_01060) walK 156637..158472 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  AAVB50_RS01065 (AAVB50_01065) walH 158462..159829 (+) 1368 WP_217019889.1 WalRK two-component regulatory system regulator WalH -
  AAVB50_RS01070 (AAVB50_01070) walI 159816..160658 (+) 843 WP_015250811.1 WalRK two-component regulatory system regulator WalI -
  AAVB50_RS01075 (AAVB50_01075) vicX 160680..161474 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  AAVB50_RS01080 (AAVB50_01080) htrA 161556..162758 (+) 1203 WP_021481077.1 serine protease HtrC Regulator
  AAVB50_RS01085 (AAVB50_01085) - 162779..162908 (+) 130 Protein_150 hypothetical protein -
  AAVB50_RS01090 (AAVB50_01090) - 162905..163405 (-) 501 WP_015250813.1 PepSY domain-containing protein -
  AAVB50_RS01095 (AAVB50_01095) - 163566..164465 (-) 900 WP_332603843.1 PepSY domain-containing protein -
  AAVB50_RS01100 (AAVB50_01100) - 164677..165360 (+) 684 WP_038428106.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=895210 AAVB50_RS01075 WP_003226939.1 160680..161474(+) (vicX) [Bacillus subtilis strain FUA2233]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=895210 AAVB50_RS01075 WP_003226939.1 160680..161474(+) (vicX) [Bacillus subtilis strain FUA2233]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCCGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53