Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   AAYR26_RS17335 Genome accession   NZ_CP154901
Coordinates   3219127..3221175 (-) Length   682 a.a.
NCBI ID   WP_009328528.1    Uniprot ID   Q65JR1
Organism   Bacillus licheniformis strain FUA2146     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3214127..3226175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR26_RS17305 (AAYR26_17310) rnc 3214526..3215275 (-) 750 WP_009328527.1 ribonuclease III -
  AAYR26_RS17310 (AAYR26_17315) acpP 3215417..3215650 (-) 234 WP_003181706.1 acyl carrier protein -
  AAYR26_RS17315 (AAYR26_17320) fabG 3215727..3216470 (-) 744 WP_003181704.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  AAYR26_RS17320 (AAYR26_17325) fabD 3216457..3217416 (-) 960 WP_003181702.1 ACP S-malonyltransferase -
  AAYR26_RS17325 (AAYR26_17330) plsX 3217434..3218426 (-) 993 WP_003181700.1 phosphate acyltransferase PlsX -
  AAYR26_RS17330 (AAYR26_17335) fapR 3218444..3219010 (-) 567 WP_003181698.1 transcription factor FapR -
  AAYR26_RS17335 (AAYR26_17340) recG 3219127..3221175 (-) 2049 WP_009328528.1 ATP-dependent DNA helicase RecG Machinery gene
  AAYR26_RS17340 (AAYR26_17345) sdaAA 3221153..3222055 (-) 903 WP_009328529.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  AAYR26_RS17345 (AAYR26_17350) sdaAB 3222074..3222736 (-) 663 WP_003181691.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  AAYR26_RS17350 (AAYR26_17355) - 3222918..3224588 (-) 1671 WP_003181689.1 DAK2 domain-containing protein -
  AAYR26_RS17355 (AAYR26_17360) - 3224606..3224968 (-) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -
  AAYR26_RS17360 (AAYR26_17365) rpmB 3225256..3225444 (+) 189 WP_003181685.1 50S ribosomal protein L28 -
  AAYR26_RS17365 (AAYR26_17370) spoVM 3225549..3225629 (-) 81 WP_003221545.1 stage V sporulation protein SpoVM -

Sequence


Protein


Download         Length: 682 a.a.        Molecular weight: 77627.13 Da        Isoelectric Point: 7.3550

>NTDB_id=894859 AAYR26_RS17335 WP_009328528.1 3219127..3221175(-) (recG) [Bacillus licheniformis strain FUA2146]
MEHNLQLSISVIKGVGTETEKTLNELGIYTVLDLLNYFPYRYDDYELRDLEDVAHDERVTVEGKVHSEPSLAYYGKKRSR
LTFRLLVGNYLITAVCFNRPYLKKKLAIGSIVTVTGKWDKHRQSVMVQELKNGPHQGDQSIEPVYSVKENITVKTMRKLI
QEAVRSHLPFAEDPLPEKLRTAYKLLSYQEAVKAMHKPESREALKHARRRFVYEEFLLFQLKMQALRKFEREASDGISHT
FRLEDVNSFVKSLPFPLTNAQAKALDDILRDMASGYKMNRLLQGDVGSGKTAVAAIALYASLLSGFQGAMMVPTEILAEQ
HADSLVSLFEQHDVNVALLTSSVKGKRRRELLERLKEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRS
KGKDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLERILAFIDKELKKGRQAYVICPLIEESD
KLDVQNAIDVHSMLTHAFRGRWQIGLMHGKLSNDEKEQVMRQFSKNECQILVSTTVVEVGVNVPNATVMLIYDADRFGLS
QLHQLRGRVGRGDHQSYCILMADPKSETGKERMSIMSETTDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARRDAAELVSSKAFWTDAEYKSLREHLQNSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=894859 AAYR26_RS17335 WP_009328528.1 3219127..3221175(-) (recG) [Bacillus licheniformis strain FUA2146]
GTGGAACACAATCTGCAACTTAGTATATCTGTTATAAAAGGCGTCGGGACGGAAACGGAAAAAACGTTGAACGAGCTCGG
AATCTATACGGTTCTCGATCTTTTAAACTACTTCCCGTACCGATATGACGATTATGAATTGCGCGATTTGGAAGATGTGG
CACACGATGAACGAGTGACGGTGGAAGGGAAGGTTCACAGCGAGCCTTCTCTTGCCTATTACGGGAAAAAGCGGAGCCGT
CTCACGTTCCGGCTTTTGGTCGGGAACTATTTGATCACAGCGGTTTGCTTTAACAGGCCTTATTTGAAAAAAAAGCTTGC
GATCGGCTCGATTGTTACCGTAACCGGAAAATGGGACAAGCACAGACAATCCGTGATGGTGCAAGAGCTGAAAAACGGGC
CGCACCAGGGTGATCAGTCGATTGAACCCGTATACTCCGTCAAAGAAAACATCACCGTAAAGACGATGAGGAAATTGATT
CAGGAAGCTGTCCGCAGCCATTTGCCGTTTGCCGAAGATCCTCTTCCGGAAAAGCTTCGGACCGCCTACAAACTTCTGTC
TTACCAGGAGGCGGTAAAGGCGATGCACAAGCCCGAGTCGAGGGAAGCTTTAAAGCATGCGCGGCGCCGTTTTGTATATG
AGGAATTTTTGCTGTTTCAGCTGAAAATGCAGGCTTTGCGAAAGTTCGAGCGGGAAGCGTCCGACGGAATCAGCCACACC
TTTCGGCTCGAAGACGTCAATTCGTTTGTCAAAAGCCTTCCGTTTCCTTTGACAAACGCGCAGGCGAAAGCGCTCGACGA
CATATTAAGGGACATGGCTTCAGGGTATAAAATGAATCGGCTTTTGCAAGGAGACGTCGGTTCAGGCAAAACAGCCGTCG
CCGCGATTGCACTATACGCCTCGCTGCTTTCCGGATTCCAGGGGGCGATGATGGTTCCGACCGAAATACTGGCGGAACAG
CACGCCGATTCGCTTGTATCCCTCTTTGAGCAGCACGACGTCAATGTGGCGCTTTTAACAAGCTCTGTGAAAGGGAAAAG
GAGAAGAGAGCTTTTAGAAAGATTAAAAGAAGGAGAAATTGATATTTTGGTGGGGACGCACGCCCTTATTCAGGACGATG
TCCACTTTAAACAGCTCGGGCTCGTGATCACCGATGAACAGCACCGCTTCGGCGTCGAGCAAAGAAAAAAACTGAGAAGC
AAAGGGAAAGATCCCGATGTCTTGTTTATGACGGCGACGCCGATTCCGAGAACACTGGCGATCACGGTTTTCGGGGAAAT
GGATGTGTCCGTCATCGATGAAATGCCGGCTGGGCGAAAGCGGATCGAGACGTATTGGGTAAAGCACGACATGCTCGAAC
GGATTCTCGCGTTTATCGATAAAGAACTGAAAAAAGGCAGACAGGCGTATGTGATCTGTCCCTTGATTGAAGAGTCGGAC
AAGCTCGACGTTCAAAATGCAATTGATGTGCACAGCATGCTGACTCATGCCTTCAGGGGAAGATGGCAGATCGGTCTCAT
GCACGGAAAGCTGTCAAATGACGAGAAAGAACAGGTAATGAGGCAGTTCAGCAAAAACGAATGCCAGATTCTCGTTTCCA
CAACCGTCGTTGAAGTCGGGGTAAACGTTCCGAATGCGACGGTCATGCTGATCTATGATGCCGACCGGTTCGGTCTTTCC
CAGCTGCATCAGCTTCGCGGCCGGGTCGGACGGGGCGATCACCAGTCGTATTGCATCCTGATGGCAGACCCGAAATCTGA
GACGGGAAAAGAGCGCATGAGCATCATGTCTGAGACGACGGACGGCTTTGAGCTTTCTGAAAAAGATCTTGAACTCAGAG
GGCCCGGGGACTTTTTCGGCAAGAAACAGAGCGGGATGCCGGAGTTTAAAGTCGCCGACATGGTTCACGACTACCGCGCG
CTGGAAACGGCAAGAAGAGACGCTGCAGAACTTGTCTCTTCAAAAGCGTTCTGGACGGATGCCGAATATAAAAGCCTGCG
GGAACACTTGCAAAACAGCGGGGTTATGGACGGAGAAAAGCTGAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65JR1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

81.085

100

0.811

  recG/mmsA Streptococcus pneumoniae R6

49.185

98.974

0.487

  recG/mmsA Streptococcus pneumoniae R36A

49.185

98.974

0.487

  recG Neisseria meningitidis strain C311

39.445

95.161

0.375