Detailed information NTG0894654

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R3L08_RS08225
• Genome accession: NZ_CP137066
• Coordinates: 1724798..1725856 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SNUBHAB0277
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1719798..1730856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L08_RS08200 (R3L08_08200)	aroK	1720071..1720640 (-)	570	WP_000643712.1	shikimate kinase AroK	-
R3L08_RS08205 (R3L08_08205)	pilQ	1720652..1722814 (-)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L08_RS08210 (R3L08_08210)	pilP	1722882..1723409 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
R3L08_RS08215 (R3L08_08215)	pilO	1723420..1724160 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L08_RS08220 (R3L08_08220)	pilN	1724157..1724798 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
R3L08_RS08225 (R3L08_08225)	pilM	1724798..1725856 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
R3L08_RS08230 (R3L08_08230)	ponA	1726019..1728574 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
R3L08_RS08235 (R3L08_08235)	-	1728592..1729416 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
R3L08_RS08240 (R3L08_08240)	-	1729419..1729751 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=894654 R3L08_RS08225 WP_002014066.1 1724798..1725856(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0277]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=894654 R3L08_RS08225 WP_002014066.1 1724798..1725856(-) (pilM) [Acinetobacter baumannii strain SNUBHAB0277]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423