Detailed information NTG0894583

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: R3L10_RS13135
• Genome accession: NZ_CP137061
• Coordinates: 2728286..2728987 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SNUBHAB0274
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2723286..2733987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L10_RS13100 (R3L10_13105)	kdsB	2723809..2724570 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
R3L10_RS13105 (R3L10_13110)	-	2724582..2725562 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
R3L10_RS13110 (R3L10_13115)	-	2725574..2725915 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
R3L10_RS13115 (R3L10_13120)	-	2725933..2726706 (+)	774	WP_000497298.1	TatD family hydrolase	-
R3L10_RS13120 (R3L10_13125)	-	2726744..2727352 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
R3L10_RS13125 (R3L10_13130)	-	2727362..2727916 (+)	555	WP_000841373.1	type II secretion system protein	-
R3L10_RS13130 (R3L10_13135)	xcpV	2727906..2728286 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
R3L10_RS13135 (R3L10_13140)	xcpW	2728286..2728987 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
R3L10_RS13140 (R3L10_13145)	gspK	2728987..2729946 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
R3L10_RS13145 (R3L10_13150)	-	2730177..2730773 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
R3L10_RS13150 (R3L10_13155)	ung	2730824..2731537 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
R3L10_RS13155 (R3L10_13160)	-	2731534..2732658 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
R3L10_RS13160 (R3L10_13165)	tadA	2732665..2733168 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
R3L10_RS13165 (R3L10_13170)	-	2733238..2733681 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=894583 R3L10_RS13135 WP_000594589.1 2728286..2728987(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0274]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=894583 R3L10_RS13135 WP_000594589.1 2728286..2728987(+) (xcpW) [Acinetobacter baumannii strain SNUBHAB0274]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996