Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R3L12_RS09095 Genome accession   NZ_CP137057
Coordinates   1925855..1926238 (-) Length   127 a.a.
NCBI ID   WP_149930106.1    Uniprot ID   -
Organism   Acinetobacter soli strain SNUBHAB0075     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1920855..1931238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3L12_RS09080 (R3L12_09060) - 1923428..1924882 (-) 1455 WP_149930105.1 methyl-accepting chemotaxis protein -
  R3L12_RS09085 (R3L12_09065) - 1924925..1925455 (-) 531 WP_004935181.1 chemotaxis protein CheW -
  R3L12_RS09090 (R3L12_09070) - 1925457..1925828 (-) 372 WP_004935180.1 response regulator -
  R3L12_RS09095 (R3L12_09075) pilG 1925855..1926238 (-) 384 WP_149930106.1 twitching motility response regulator PilG Regulator
  R3L12_RS09100 (R3L12_09080) - 1926479..1927120 (+) 642 WP_149930107.1 hypothetical protein -
  R3L12_RS09105 (R3L12_09085) - 1927179..1928285 (+) 1107 WP_119025374.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14174.39 Da        Isoelectric Point: 5.7270

>NTDB_id=894461 R3L12_RS09095 WP_149930106.1 1925855..1926238(-) (pilG) [Acinetobacter soli strain SNUBHAB0075]
MEDAPKAIKIMVIDDSKTIRRTAETLLQKEGYTVVTATDGFEALAKIAQTNPDIIFVDIMMPRLDGYQTCALIKNSQNYQ
HIPVIMLSSKDGLFDQAKGRIVGSDEYLIKPFSKDELLSAIRNHVSV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=894461 R3L12_RS09095 WP_149930106.1 1925855..1926238(-) (pilG) [Acinetobacter soli strain SNUBHAB0075]
ATGGAAGATGCACCCAAAGCAATTAAAATTATGGTGATTGATGATTCAAAAACCATTCGTCGTACTGCTGAAACGCTGCT
GCAAAAAGAAGGCTATACCGTGGTCACGGCGACAGACGGCTTTGAAGCATTAGCAAAAATAGCACAGACTAATCCCGATA
TTATTTTTGTGGATATTATGATGCCACGCCTAGATGGATATCAAACCTGTGCGCTGATTAAAAATTCACAAAATTACCAG
CATATTCCCGTAATTATGCTTTCAAGTAAAGATGGATTATTTGATCAGGCCAAAGGGCGTATCGTGGGCTCCGATGAATA
CCTGATCAAGCCATTTAGTAAAGATGAATTGTTAAGCGCAATTCGTAATCATGTCAGTGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

85.714

99.213

0.85
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  micA Streptococcus pneumoniae Cp1015

40.351

89.764

0.362