Detailed information NTG0894450

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: R3L12_RS01085
• Genome accession: NZ_CP137057
• Coordinates: 237340..239766 (+)
• Length: 808 a.a.
• NCBI ID: WP_149930626.1
• Uniprot ID: -
• Organism: Acinetobacter soli strain SNUBHAB0075
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	236576..244443	237340..239766	within	0

Gene organization within MGE regions

Location: 236576..244443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L12_RS01080 (R3L12_01080)	lolD	236576..237262 (+)	687	WP_004939423.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
R3L12_RS01085 (R3L12_01085)	comA/comEC	237340..239766 (+)	2427	WP_149930626.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
R3L12_RS01090 (R3L12_01090)	-	239699..240715 (-)	1017	WP_149930625.1	lysophospholipid acyltransferase family protein	-
R3L12_RS01095 (R3L12_01095)	sppA	240849..241865 (+)	1017	WP_149930624.1	signal peptide peptidase SppA	-
R3L12_RS01100 (R3L12_01100)	-	241880..242683 (+)	804	WP_149930623.1	alpha/beta fold hydrolase	-
R3L12_RS01105 (R3L12_01105)	purN	242744..243376 (-)	633	WP_048765810.1	phosphoribosylglycinamide formyltransferase	-
R3L12_RS01110 (R3L12_01110)	purM	243373..244443 (-)	1071	WP_149930622.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 808 a.a.
• Molecular weight: 91405.06 Da
• Isoelectric Point: 8.2313

>NTDB_id=894450 R3L12_RS01085 WP_149930626.1 237340..239766(+) (comA/comEC) [Acinetobacter soli strain SNUBHAB0075]
MLKLIFLGWIAGIATMGHIFDPISAVTLGIAIGLYFLFLLIYLRVAQQFNSSKLLGGLLGIFSVCLSFSCGVYYADQALT
TRLEHRVTTSSVDSYIIYINRMGEQSQNGIRQPAQILNENDAPIHWVLSIDETVIPADTMAHSLAVGQYYRAVIQHQPVH
GYAIQGAFDVEKWFVQQNWRGRGKVVQLEMLSSEQALREGYYDHVKQQQSWTRKFLLAAEHLRLKFRGYFLASSLQHQSL
LLALLTGDRSLLDPELEQQFQRFGISHLLAISGPHVLIFAALMTWCIIQLINRYYAAIYLVIPRQRLMLIPFLLCVLLYC
ALVGFEIPALRTLLTVAIVSIFILLKRPVHASFLLLFSASILLLIDPFSILSAAFWLSYGACFILIRIYQEIVQEQKTGQ
SWRIRIGYAAQLLIRTQWKIFLALLPLTLLLFKQFSWMTPFANIIAIPVLGAIVVPLDVIAACFWLILPAFGHLIFQLND
GVLQAVLGLFNMMDHIFAPELQYFALRPWMIISISFGILILFLPKGTVPKCWSIICCVPVFLPAQLKSPTQLVVLDVGQG
QSVFIQDQTQRILLDTGGNHDEQKFSVGRQVVVPFLKAQGVKQLDRIILSHLDQDHSGALPAILDAISVTQIQANEPMPK
LQSTFELCYAGQRFETPETIIQVLSPALQEIGRADTNRNESSCVMHIEFKNNQPIRHFLIMGDAGWETEFKLLQHYPDLR
VDVLVLGHHGSRHSSAYDFLQHYRPQYAIASAGATNRYGHPSIEVQVRLAALQIPLLSTAKAGSISFSFDQANEQPRFYR
HQYRWLTQ

Nucleotide

• Length: 2427 bp

>NTDB_id=894450 R3L12_RS01085 WP_149930626.1 237340..239766(+) (comA/comEC) [Acinetobacter soli strain SNUBHAB0075]
ATGCTAAAGCTTATTTTTCTGGGGTGGATTGCAGGAATTGCAACCATGGGACATATATTTGATCCCATATCGGCTGTCAC
ACTCGGTATCGCGATCGGTCTATATTTCCTATTTTTACTCATCTATCTACGTGTGGCCCAACAGTTCAACTCTTCGAAAT
TGTTAGGCGGCTTATTGGGCATCTTTTCGGTGTGTTTGTCGTTTAGCTGTGGCGTCTATTACGCCGATCAGGCACTCACC
ACGCGGCTTGAGCATCGCGTCACGACCTCTTCAGTCGACTCATACATCATCTACATCAACCGTATGGGGGAGCAGTCTCA
AAACGGAATCAGACAGCCTGCACAGATTCTCAATGAAAATGATGCTCCCATTCACTGGGTACTTTCCATAGATGAAACAG
TTATCCCTGCTGATACCATGGCGCATAGTTTAGCTGTTGGGCAGTATTATCGTGCCGTGATCCAGCATCAACCTGTGCAT
GGTTACGCTATACAAGGTGCATTCGATGTAGAAAAATGGTTCGTACAACAAAACTGGCGAGGACGTGGCAAAGTTGTACA
ACTCGAAATGCTTTCAAGTGAACAGGCGCTACGTGAAGGATATTATGATCATGTGAAACAGCAACAATCTTGGACTCGAA
AATTTTTGCTTGCTGCCGAGCACTTAAGATTAAAATTTAGAGGCTATTTTCTTGCTTCTTCCTTACAACATCAAAGCTTA
CTTCTGGCCTTACTCACGGGCGATCGAAGTCTTCTTGATCCTGAGCTTGAGCAGCAGTTTCAACGCTTTGGTATTTCACA
TTTGCTGGCGATATCTGGGCCGCATGTGCTTATTTTTGCAGCGCTGATGACATGGTGTATTATCCAATTGATCAATCGAT
ACTACGCCGCAATTTATTTGGTGATTCCACGCCAGCGACTGATGCTGATTCCATTTTTATTATGCGTACTCCTGTATTGC
GCGTTGGTGGGGTTTGAAATTCCTGCTCTAAGAACGCTGCTGACCGTAGCTATAGTGAGTATTTTCATACTTTTAAAACG
TCCTGTACATGCCAGTTTCTTGTTGCTGTTCAGTGCTTCTATTTTATTACTCATCGATCCGTTTAGCATACTTTCGGCAG
CATTTTGGCTATCTTATGGGGCCTGTTTTATTCTGATTCGTATTTATCAGGAAATTGTACAGGAGCAAAAGACTGGTCAA
TCTTGGCGTATTCGAATCGGATATGCTGCGCAGCTTCTTATCAGAACACAATGGAAAATCTTTCTCGCACTGTTACCCCT
GACCTTATTGCTCTTTAAACAGTTTTCTTGGATGACTCCATTTGCCAATATCATTGCCATTCCAGTTCTGGGTGCCATCG
TGGTGCCTTTAGATGTTATCGCTGCATGCTTCTGGCTCATCCTTCCTGCATTTGGACATTTGATTTTTCAACTCAATGAT
GGGGTATTACAGGCTGTTTTGGGTCTGTTTAATATGATGGATCATATCTTTGCACCGGAGTTACAATATTTTGCACTTCG
TCCTTGGATGATCATCAGCATTTCATTTGGCATTTTAATTTTATTTTTGCCTAAAGGCACAGTGCCTAAATGCTGGTCAA
TCATATGCTGTGTGCCTGTTTTTCTACCTGCACAATTAAAATCACCTACCCAATTAGTGGTGTTAGATGTCGGTCAAGGA
CAGTCTGTGTTCATCCAAGATCAGACACAACGAATACTGCTCGACACTGGCGGCAATCACGATGAGCAAAAGTTTAGTGT
AGGTAGGCAGGTGGTGGTGCCATTTTTGAAGGCACAGGGCGTAAAGCAGCTAGACCGAATTATACTGTCACATTTAGATC
AAGATCATAGCGGGGCATTACCTGCGATTCTGGATGCAATATCGGTTACGCAGATTCAAGCCAATGAACCAATGCCTAAA
CTTCAATCTACTTTTGAGCTGTGCTATGCCGGACAGCGTTTTGAGACACCTGAAACCATTATACAAGTTTTATCACCAGC
GCTTCAGGAGATCGGACGTGCTGATACGAATCGAAATGAATCGTCATGTGTTATGCATATCGAGTTTAAAAACAATCAAC
CCATACGACATTTTTTAATTATGGGAGATGCAGGTTGGGAAACCGAGTTTAAATTACTTCAACATTATCCGGATCTGCGC
GTAGATGTTTTGGTTTTGGGGCATCACGGGAGTCGTCATAGTTCAGCCTATGATTTTTTACAGCATTATCGGCCTCAATA
TGCGATTGCATCGGCAGGTGCAACCAATCGTTATGGCCATCCTAGTATTGAAGTTCAGGTACGACTGGCAGCGTTACAAA
TTCCTTTACTCAGCACAGCCAAAGCAGGCAGTATTTCTTTTAGTTTTGATCAAGCGAATGAGCAGCCACGTTTTTATCGC
CATCAATACCGCTGGTTAACACAATAG

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (556-669)

• Competence protein (Competence) (244-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baylyi ADP1	56.452	99.752	0.563
comA/comEC	Acinetobacter baumannii strain A118	47.284	100	0.474
comA/comEC	Acinetobacter baumannii D1279779	47.919	98.144	0.47