Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   AAFU62_RS01930 Genome accession   NZ_CP154891
Coordinates   375733..377784 (+) Length   683 a.a.
NCBI ID   WP_345866886.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 318231     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 370733..382784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFU62_RS01910 (AAFU62_01910) - 371031..372700 (+) 1670 Protein_323 ABC transporter ATP-binding protein -
  AAFU62_RS01915 (AAFU62_01915) - 372697..373290 (+) 594 WP_002995377.1 MptD family putative ECF transporter S component -
  AAFU62_RS01920 (AAFU62_01920) - 373287..373967 (+) 681 WP_002983239.1 energy-coupling factor transporter transmembrane component T -
  AAFU62_RS01925 (AAFU62_01925) - 373904..375358 (+) 1455 WP_050580834.1 ABC transporter ATP-binding protein -
  AAFU62_RS01930 (AAFU62_01930) recG/mmsA 375733..377784 (+) 2052 WP_345866886.1 ATP-dependent DNA helicase RecG Machinery gene
  AAFU62_RS01935 (AAFU62_01935) - 378039..378941 (+) 903 WP_002991995.1 ABC transporter ATP-binding protein -
  AAFU62_RS01940 (AAFU62_01940) - 378954..379658 (+) 705 WP_002988556.1 ABC transporter permease -
  AAFU62_RS01945 (AAFU62_01945) - 380007..380972 (-) 966 WP_002983258.1 asparaginase -
  AAFU62_RS01950 (AAFU62_01950) - 381044..382432 (+) 1389 WP_038434237.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 683 a.a.        Molecular weight: 76561.82 Da        Isoelectric Point: 8.7805

>NTDB_id=894271 AAFU62_RS01930 WP_345866886.1 375733..377784(+) (recG/mmsA) [Streptococcus pyogenes strain 318231]
MILTAPMSNLKGFGPKSAEKFQKLDIYTVEDLLLYYPFRYEDFKSKSVFDLVDGEKAVITGLVVTPANVQYYGFKRNRLS
FKLRQGEAVLNVSFFNQPYLADKIELGQEVAVFGKWDATKSAITGMKVLAQVEDDMQPVYRVAQGISQSTLIKAIKSAFE
IDAHLELKENLPATLLEKYRLMGRSQACLAMHFPKDITEYKQALRRIKFEELFYFQMNLQVLKAENRSETNGLPILYSKH
AMETKISSLPFILTNAQKRSLDDILSDMSSGAHMNRLLQGDVGSGKTVIAGLSMYAAYTAGFQSALMVPTEILAEQHYIS
LQELFPDLSIAILTSGMKAAVKRTVLAAIANGSVDMIVGTHALIQDSVQYHKLGLVITDEQHRFGVKQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSVIDELPAGRKPIMTRWVKHEQLGTVLEWVKGELQKDAQVYVISPLIEESEALDLKN
AVALHAELSTYFEGIAKVALVHGRMKNDEKDAIMQDFKDKKSHILVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGHKQSYAVLVANPKTDSGKKRMTIMTETTDGFVLAESDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARK
VSAAIVSDPNWIYEKQWQLVAKNIRKKKFMINLKQVVVLQIFS

Nucleotide


Download         Length: 2052 bp        

>NTDB_id=894271 AAFU62_RS01930 WP_345866886.1 375733..377784(+) (recG/mmsA) [Streptococcus pyogenes strain 318231]
ATGATATTAACAGCTCCTATGTCCAACTTAAAGGGATTTGGACCAAAATCAGCAGAAAAATTTCAGAAATTAGATATTTA
TACAGTAGAAGATTTACTGCTTTATTATCCGTTTCGCTATGAAGATTTTAAATCAAAATCTGTTTTTGATTTAGTGGATG
GTGAAAAAGCAGTCATTACAGGCTTAGTCGTTACTCCAGCTAATGTACAATATTATGGTTTTAAACGTAACCGTTTAAGT
TTCAAATTGCGTCAAGGAGAAGCTGTCTTAAATGTTAGTTTTTTTAATCAACCCTATTTAGCTGATAAAATAGAACTTGG
TCAAGAGGTAGCTGTTTTTGGTAAATGGGATGCCACTAAATCGGCTATTACTGGGATGAAGGTTTTAGCTCAAGTTGAAG
ATGACATGCAACCTGTTTATCGCGTAGCTCAGGGAATTTCACAGTCTACTTTGATTAAAGCTATTAAGTCAGCTTTTGAA
ATCGATGCGCATTTGGAATTGAAGGAAAATTTACCAGCTACTTTATTGGAAAAATACCGATTGATGGGTCGTAGTCAGGC
TTGTTTAGCTATGCATTTCCCAAAAGATATCACAGAGTATAAGCAAGCGCTCCGTCGGATTAAATTTGAAGAATTATTTT
ACTTTCAAATGAACCTTCAAGTTTTGAAAGCCGAAAATAGATCTGAAACAAATGGTTTGCCTATTCTTTATAGTAAACAT
GCTATGGAGACAAAGATTTCCTCTTTACCTTTTATTCTAACGAATGCTCAAAAGCGCTCTTTAGATGACATATTATCTGA
TATGTCATCGGGAGCTCATATGAATCGTTTATTGCAAGGAGATGTAGGATCAGGAAAGACAGTCATTGCTGGTCTATCAA
TGTATGCAGCTTATACAGCAGGTTTTCAATCGGCTTTGATGGTTCCAACGGAAATCCTAGCTGAACAACACTATATTAGT
CTGCAAGAGTTATTTCCAGATTTATCAATTGCTATATTAACTTCGGGTATGAAAGCCGCTGTCAAGCGTACGGTTTTAGC
AGCTATTGCAAATGGCTCGGTTGATATGATTGTAGGAACTCATGCTCTTATCCAAGACTCGGTACAGTACCATAAACTGG
GGCTTGTCATTACAGACGAGCAACATCGTTTTGGTGTTAAACAGCGTAGAATTTTCCGTGAAAAGGGAGAAAATCCTGAT
GTTTTAATGATGACAGCCACCCCAATTCCCCGAACCCTAGCAATCACAGCTTTTGGAGAAATGGATGTTTCTGTTATTGA
TGAATTACCTGCAGGTCGTAAACCTATTATGACACGCTGGGTGAAACACGAGCAGCTAGGGACTGTGTTGGAATGGGTAA
AAGGTGAATTGCAAAAAGATGCTCAAGTGTATGTCATTTCACCGTTGATTGAAGAATCAGAAGCTTTAGATTTAAAGAAT
GCAGTAGCATTGCATGCTGAATTATCTACTTATTTTGAAGGAATTGCTAAGGTTGCTCTTGTACATGGACGTATGAAAAA
TGATGAAAAAGATGCTATAATGCAAGATTTCAAGGATAAAAAAAGTCATATTTTAGTATCCACAACAGTTATTGAAGTAG
GGGTAAATGTCCCAAATGCAACGATCATGATTATTATGGATGCCGATCGTTTTGGATTAAGTCAGTTACATCAACTTCGT
GGGCGTGTTGGTCGTGGACATAAACAATCATACGCTGTTTTAGTGGCTAATCCCAAAACGGATTCGGGGAAAAAACGAAT
GACAATCATGACAGAAACGACAGATGGTTTCGTTTTGGCTGAGTCGGATTTAAAAATGCGTGGTTCTGGCGAAATCTTTG
GTACTCGTCAGTCTGGAATTCCAGAATTTCAAGTAGCTGATATCGTTGAGGATTATCCTATTTTAGAAGAAGCACGCAAA
GTTTCTGCAGCGATTGTTTCTGATCCTAATTGGATATATGAAAAACAGTGGCAATTAGTAGCAAAAAATATTAGAAAAAA
GAAGTTTATGATTAACTTAAAACAAGTCGTTGTTTTACAAATATTTAGTTAG

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

RecG wedge domain (RecG_wedge)

(10-157)

DEAD/DEAH box helicase (DEAD)

(254-411)

Helicase conserved C-terminal domain (Helicase_C)

(458-566)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

71.493

98.097

0.701
  recG/mmsA Streptococcus pneumoniae R36A

71.493

98.097

0.701
  recG Bacillus subtilis subsp. subtilis str. 168

50.538

95.315

0.482
  recG Neisseria meningitidis strain C311

38.88

96.779

0.376