Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   R0Q54_RS12680 Genome accession   NZ_CP136992
Coordinates   2391579..2392529 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain J46     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2386579..2397529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0Q54_RS12655 (R0Q54_12655) rapC 2388034..2389182 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  R0Q54_RS12660 (R0Q54_12660) phrC 2389166..2389288 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  R0Q54_RS12665 (R0Q54_12665) yczM 2389387..2389476 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  R0Q54_RS12670 (R0Q54_12670) yczN 2389558..2389671 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  R0Q54_RS12675 (R0Q54_12675) thrD 2389824..2391188 (-) 1365 WP_021481755.1 aspartate kinase -
  R0Q54_RS12680 (R0Q54_12680) ceuB 2391579..2392529 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  R0Q54_RS12685 (R0Q54_12685) yclO 2392522..2393469 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  R0Q54_RS12690 (R0Q54_12690) yclP 2393463..2394221 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  R0Q54_RS12695 (R0Q54_12695) yclQ 2394243..2395196 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  R0Q54_RS12700 (R0Q54_12700) - 2395426..2396358 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=894061 R0Q54_RS12680 WP_014475804.1 2391579..2392529(+) (ceuB) [Bacillus subtilis strain J46]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=894061 R0Q54_RS12680 WP_014475804.1 2391579..2392529(+) (ceuB) [Bacillus subtilis strain J46]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525