Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   R3H61_RS06915 Genome accession   NZ_CP136951
Coordinates   1403417..1404418 (-) Length   333 a.a.
NCBI ID   WP_002985680.1    Uniprot ID   A0A4U7H1B9
Organism   Streptococcus pyogenes strain Spyo09     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1398417..1409418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3H61_RS06900 (R3H61_06905) thrS 1398587..1400530 (-) 1944 WP_111715666.1 threonine--tRNA ligase -
  R3H61_RS06905 (R3H61_06910) - 1400952..1402286 (-) 1335 WP_129284141.1 glycosyltransferase family 4 protein -
  R3H61_RS06910 (R3H61_06915) - 1402288..1403286 (-) 999 WP_330554617.1 glycosyltransferase family 4 protein -
  R3H61_RS06915 (R3H61_06920) ccpA 1403417..1404418 (-) 1002 WP_002985680.1 catabolite control protein A Regulator
  R3H61_RS06920 (R3H61_06925) - 1404592..1405677 (+) 1086 WP_063812458.1 aminopeptidase P family protein -
  R3H61_RS06925 (R3H61_06930) - 1405726..1406391 (+) 666 WP_002985684.1 NAD(P)H-dependent oxidoreductase -
  R3H61_RS06930 (R3H61_06935) - 1406402..1406779 (+) 378 WP_020904973.1 VOC family protein -
  R3H61_RS06935 (R3H61_06940) - 1406924..1407850 (+) 927 WP_032464862.1 glycosyltransferase family 2 protein -
  R3H61_RS06940 (R3H61_06945) - 1408061..1408744 (+) 684 WP_011017476.1 DUF969 domain-containing protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36713.83 Da        Isoelectric Point: 5.9985

>NTDB_id=893728 R3H61_RS06915 WP_002985680.1 1403417..1404418(-) (ccpA) [Streptococcus pyogenes strain Spyo09]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLDHQLPS
VNIDYRAAVSNVVDILAENHKCIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=893728 R3H61_RS06915 WP_002985680.1 1403417..1404418(-) (ccpA) [Streptococcus pyogenes strain Spyo09]
ATGAATACAGATGATACCATTACAATTTATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGTGTTGT
TAATGGCAATAAAAATGTTAAGGAAAATACACGTAAGAAAGTTTTAGAAGTTATTGATCGCCTTGACTATCGTCCCAATG
CTGTCGCGCGTGGTCTCGCCAGCAAAAAGACAACAACCGTTGGCGTTGTGATTCCAAATATTGCAAATAGTTATTTTTCT
ATCTTAGCTAAGGGTATTGACGATATCGCCGCTATGTACAAATATAATATTGTGCTTGCCTCCAGTGATGAAGATGATGA
CAAGGAGGTTAATGTTGTCAATACCCTTTTTGCCAAGCAAGTGGATGGTATTATTTTTATGGGGCATCACTTGACAGAAA
AAATCCGGGCCGAGTTTTCACGCTCTCGTACTCCAGTTGTTTTGGCAGGAACTGTAGATCTTGATCATCAATTACCAAGC
GTCAACATTGACTATAGAGCTGCGGTGTCAAATGTTGTTGATATTTTAGCTGAAAATCATAAGTGTATCGCTTTTGTGTC
AGGACCACTCATTGATGATATCAATGGTAAAGTGCGCTTAGCAGGTTACAAAGAAGGGTTGAAGCACAATAAGCTTGACT
TCAAAGAAGGTCTTGTTTTTGAAGCGAACTATTCTTATAAAGAAGGATTTGAATTGGCGCAGCGCGTCATTAACTCAGGA
GCAACAGCGGCTTATGTGGCTGAAGATGAATTGGCAGCGGGCCTTTTAAACGGCTTGTTTGAAGCAGGTAAACGCGTACC
AGAGGACTTTGAAATCATCACCAGCAACGATTCACCAGTGGTTCAATACACTCGTCCCAATTTGAGTTCTATCAGTCAAC
CTGTTTATGACTTAGGTGCTGTTAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGTGGGACAACTAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7H1B9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.375

100

0.754

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.193

99.399

0.559