Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   R1T10_RS03315 Genome accession   NZ_CP136807
Coordinates   639165..639809 (+) Length   214 a.a.
NCBI ID   WP_002220358.1    Uniprot ID   A0A0U1RK99
Organism   Neisseria meningitidis NMB     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 634165..644809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R1T10_RS03295 putP 634354..635880 (-) 1527 WP_002227025.1 sodium/proline symporter PutP -
  R1T10_RS03300 - 636363..636683 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  R1T10_RS03305 comM 636697..638193 (+) 1497 WP_002238765.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  R1T10_RS03310 ftsN 638299..639162 (+) 864 WP_002244455.1 cell division protein FtsN -
  R1T10_RS03315 dsbA1 639165..639809 (+) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  R1T10_RS03320 - 639842..640663 (+) 822 WP_002244454.1 undecaprenyl-diphosphate phosphatase -
  R1T10_RS03335 - 641245..642462 (-) 1218 WP_017201236.1 class I SAM-dependent methyltransferase -
  R1T10_RS03340 mraZ 642741..643196 (+) 456 WP_002222027.1 division/cell wall cluster transcriptional repressor MraZ -
  R1T10_RS03345 rsmH 643193..644179 (+) 987 WP_002244453.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  R1T10_RS03350 ftsL 644176..644439 (+) 264 WP_002232818.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23970.99 Da        Isoelectric Point: 10.0160

>NTDB_id=892843 R1T10_RS03315 WP_002220358.1 639165..639809(+) (dsbA1) [Neisseria meningitidis NMB]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVKLSGLKYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=892843 R1T10_RS03315 WP_002220358.1 639165..639809(+) (dsbA1) [Neisseria meningitidis NMB]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAAAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTAAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGAAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTACGACTCTCCTGCGGCAGCGGCTGCTGCATCAAAAATGCAGCAA
TTGACGGAACAGTACCGCATCGACAGTACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGTGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RK99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.851

87.85

0.491
  dsbA2 Neisseria meningitidis MC58

50.538

86.916

0.439