Detailed information NTG0892532

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AAHH81_RS09000
• Genome accession: NZ_CP152418
• Coordinates: 1766230..1767129 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904870.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 20234287
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1761230..1772129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHH81_RS08975 (AAHH81_08960)	rsmA	1761560..1762432 (-)	873	WP_001216878.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
AAHH81_RS08980 (AAHH81_08965)	-	1762563..1762871 (-)	309	WP_000333257.1	hypothetical protein	-
AAHH81_RS08985 (AAHH81_08970)	-	1762864..1763505 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
AAHH81_RS08990 (AAHH81_08975)	-	1763507..1765537 (-)	2031	WP_061813569.1	bacteriocin-associated integral membrane family protein	-
AAHH81_RS08995 (AAHH81_08980)	-	1765614..1765910 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
AAHH81_RS09000 (AAHH81_08985)	comR	1766230..1767129 (-)	900	WP_000904870.1	helix-turn-helix transcriptional regulator	Regulator
AAHH81_RS09005 (AAHH81_08990)	rnmV	1767201..1767761 (-)	561	WP_000660019.1	ribonuclease M5	-
AAHH81_RS09010 (AAHH81_08995)	-	1767761..1768534 (-)	774	WP_061813568.1	TatD family hydrolase	-
AAHH81_RS09015 (AAHH81_09000)	-	1768839..1769810 (-)	972	Protein_1761	DUF1542 domain-containing protein	-
AAHH81_RS09020 (AAHH81_09005)	rpmH	1770016..1770150 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
AAHH81_RS09025 (AAHH81_09010)	-	1770295..1771509 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
AAHH81_RS09030 (AAHH81_09015)	-	1771665..1771958 (-)	294	WP_061813566.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35351.12 Da
• Isoelectric Point: 4.8336

>NTDB_id=892532 AAHH81_RS09000 WP_000904870.1 1766230..1767129(-) (comR) [Streptococcus pneumoniae strain 20234287]
MLIGQKIKEIRIEKGVSRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=892532 AAHH81_RS09000 WP_000904870.1 1766230..1767129(-) (comR) [Streptococcus pneumoniae strain 20234287]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAGTTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361