Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   R0492_RS16885 Genome accession   NZ_CP136649
Coordinates   3220457..3222763 (-) Length   768 a.a.
NCBI ID   WP_161658321.1    Uniprot ID   -
Organism   Bacillus licheniformis strain NXU98     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3215457..3227763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R0492_RS16845 - 3215919..3216350 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  R0492_RS16850 - 3216350..3216691 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  R0492_RS16855 - 3216684..3218162 (+) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  R0492_RS16860 - 3218168..3218644 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  R0492_RS16865 - 3218644..3218928 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  R0492_RS16870 mnhG 3218912..3219286 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  R0492_RS16875 - 3219326..3219715 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  R0492_RS16880 comA 3219732..3220370 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  R0492_RS16885 comP 3220457..3222763 (-) 2307 WP_161658321.1 histidine kinase Regulator
  R0492_RS16890 comX 3222786..3222950 (-) 165 WP_003184853.1 competence pheromone ComX -
  R0492_RS16895 - 3222959..3223840 (-) 882 WP_003184856.1 polyprenyl synthetase family protein -
  R0492_RS16900 - 3224109..3225271 (+) 1163 WP_085959889.1 IS3 family transposase -
  R0492_RS16905 degQ 3225317..3225457 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  R0492_RS16910 - 3225943..3226290 (+) 348 WP_009329512.1 hypothetical protein -
  R0492_RS16915 - 3226333..3227553 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 88417.75 Da        Isoelectric Point: 6.9880

>NTDB_id=892243 R0492_RS16885 WP_161658321.1 3220457..3222763(-) (comP) [Bacillus licheniformis strain NXU98]
MKFSLKLVSVTLVVITCIYTFFVIYLCYNNMFVGAYLAYNSKNQLVVDYVEEDSLADYTGLKAGDIILEVNNEKPSKKEP
KNKILADVRSLSIERNGKIITTDTRDTIISYDVLFTVLIPVVFYLLCMFCVFLILKSNKTNKQMSSFLLISFLIIISLAY
VSVGGVSRGDKFSRYLNLLTFLSVPASYYHFILQYFKEIGKKFFSNKILLLYALPFLNIVLEIFYDLTDFLEEGRPYVNL
FSFFIGIVLVFGVIIYGLIKYKHSEEIYFLKMLMLGNFLGVFPFVVFFVLPILIIGDYIYSAAVVAPCLLIIPFSLVYQF
ISNKTYDVEFLVGRLKYYGLLAIIPTIMLISAFKLIKYQTGDYYDLRFTIYIYLVMLGVFYLKEILDYRFRLKRFSEKYN
YQDSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEEDAKEYPWIPYEQEVTKVITDIGKIVE
VDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNKLMF
AIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKACTNQIRQRLINMNEQMSAVIQTTRETCQELRPQLLYDLG
LVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHYEDDGI
GVDPDKLYQNSASMELSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=892243 R0492_RS16885 WP_161658321.1 3220457..3222763(-) (comP) [Bacillus licheniformis strain NXU98]
ATGAAATTTTCATTGAAGTTAGTGTCAGTAACTCTTGTGGTGATTACCTGTATATATACTTTCTTTGTTATATATCTATG
TTATAACAACATGTTTGTAGGTGCATACTTAGCCTACAATTCGAAAAACCAGCTAGTTGTGGATTATGTTGAGGAAGATT
CCTTAGCCGATTATACGGGTTTAAAAGCTGGAGATATCATTCTTGAGGTTAATAATGAGAAGCCGTCTAAGAAGGAACCA
AAAAATAAAATTCTAGCAGATGTCCGTTCACTTTCTATTGAGAGAAATGGAAAAATCATTACAACTGATACAAGGGATAC
TATTATTAGTTATGATGTTTTATTTACTGTTTTAATCCCGGTTGTATTTTATTTATTATGCATGTTTTGTGTGTTTTTGA
TTTTAAAATCTAACAAGACGAATAAACAAATGTCTTCATTTTTGCTAATTTCATTTTTAATCATAATTTCACTGGCTTAT
GTAAGTGTCGGTGGAGTTTCAAGAGGTGATAAATTTAGCCGATATCTGAATTTGTTAACCTTTCTATCAGTACCTGCTAG
TTATTATCACTTTATACTTCAATATTTCAAAGAAATTGGCAAAAAATTCTTTAGCAATAAAATATTGTTGCTCTATGCTT
TACCTTTCTTGAATATCGTTTTAGAAATTTTTTATGACCTTACTGATTTTCTTGAGGAAGGTAGGCCATATGTCAATTTG
TTTTCGTTCTTTATAGGAATTGTTTTAGTTTTCGGAGTTATTATTTACGGTTTAATTAAATATAAGCATTCAGAGGAAAT
TTATTTCTTGAAAATGCTTATGTTAGGAAATTTCCTTGGTGTTTTTCCTTTTGTAGTATTCTTTGTTCTTCCAATTTTAA
TTATTGGGGATTATATTTATTCCGCCGCAGTAGTAGCTCCATGTCTATTGATCATTCCGTTTTCTTTAGTTTATCAATTC
ATATCTAATAAAACTTATGATGTGGAGTTTTTGGTTGGAAGATTAAAATACTATGGCCTATTGGCGATTATTCCAACAAT
TATGTTGATATCTGCTTTCAAGCTAATAAAGTATCAAACTGGGGACTACTATGATCTAAGATTCACAATCTATATCTACC
TGGTCATGCTCGGTGTTTTTTACCTTAAAGAAATCCTTGATTATCGCTTCCGTCTGAAACGTTTTTCAGAGAAGTATAAC
TACCAAGACAGTATATTTAAGTTCACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATTGAAACA
AACAATTCTTGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTCAAAAGCGACGGAACAATATCTTTGCTCGAAG
AAGATGCCAAAGAATATCCGTGGATCCCCTACGAACAAGAAGTAACCAAGGTGATCACCGACATCGGCAAAATCGTCGAA
GTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTTGTCGGTTTTAAATAC
GCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACGTGCTGA
AAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTGATGTTT
GCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATATGATTTCCTTGAAGCA
TCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGCCTGTACGAATCAAATCCGGCAAAGGCTCATCAATATGA
ATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAAGAGCTGAGGCCGCAGCTGTTGTACGATCTCGGA
CTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATACGGAAAG
GTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGGTTAAAC
ATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGACGGCATT
GGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGAGCTGTCGGGCATTCGCGAGCGCGTCCGCGCACTGAA
CGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(679-763)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

51.675

100

0.522