Detailed information NTG0892159

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RZ534_RS17085
• Genome accession: NZ_CP136643
• Coordinates: 3283301..3284476 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain RS1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3278301..3289476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RZ534_RS17055 (RZ534_17055)	-	3278477..3278896 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
RZ534_RS17060 (RZ534_17060)	-	3278953..3279675 (-)	723	WP_390308590.1	ComF family protein	-
RZ534_RS17065 (RZ534_17065)	-	3279636..3279929 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
RZ534_RS17070 (RZ534_17070)	comFA	3279994..3281373 (-)	1380	WP_394804960.1	DEAD/DEAH box helicase	Machinery gene
RZ534_RS17075 (RZ534_17075)	-	3281493..3282335 (-)	843	WP_007499966.1	DegV family protein	-
RZ534_RS17080 (RZ534_17080)	degU	3282547..3283236 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
RZ534_RS17085 (RZ534_17085)	degS	3283301..3284476 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
RZ534_RS17090 (RZ534_17090)	-	3284698..3285366 (+)	669	WP_017357860.1	YigZ family protein	-
RZ534_RS17095 (RZ534_17095)	-	3285351..3286442 (+)	1092	WP_317328097.1	LCP family protein	-
RZ534_RS17100 (RZ534_17100)	-	3286479..3287546 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
RZ534_RS17105 (RZ534_17105)	-	3287681..3288928 (-)	1248	WP_317328098.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=892159 RZ534_RS17085 WP_003213166.1 3283301..3284476(-) (degS) [Bacillus altitudinis strain RS1]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=892159 RZ534_RS17085 WP_003213166.1 3283301..3284476(-) (degS) [Bacillus altitudinis strain RS1]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841