Detailed information NTG0892064

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RAS18_RS17610
• Genome accession: NZ_CP136635
• Coordinates: 3506198..3507361 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus subsp. globigii strain Hab-5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3501198..3512361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAS18_RS17580	-	3501449..3501868 (-)	420	WP_106044747.1	TIGR03826 family flagellar region protein	-
RAS18_RS17585	comFC	3501940..3502662 (-)	723	WP_148666412.1	double zinc ribbon domain-containing protein	Machinery gene
RAS18_RS17590	-	3502626..3502922 (-)	297	WP_010790084.1	late competence development ComFB family protein	-
RAS18_RS17595	comFA	3502979..3504376 (-)	1398	WP_406620965.1	ATP-dependent helicase ComFA	Machinery gene
RAS18_RS17600	-	3504483..3505325 (-)	843	WP_061570956.1	DegV family protein	-
RAS18_RS17605	degU	3505432..3506121 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RAS18_RS17610	degS	3506198..3507361 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
RAS18_RS17615	-	3507579..3508232 (+)	654	WP_003326713.1	YigZ family protein	-
RAS18_RS17620	-	3508232..3509455 (+)	1224	WP_406620966.1	LCP family protein	-
RAS18_RS17625	-	3509545..3510621 (-)	1077	WP_214916312.1	MraY family glycosyltransferase	-
RAS18_RS17630	tuaH	3510761..3511951 (-)	1191	WP_406620967.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=892064 RAS18_RS17610 WP_003326714.1 3506198..3507361(-) (degS) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=892064 RAS18_RS17610 WP_003326714.1 3506198..3507361(-) (degS) [Bacillus atrophaeus subsp. globigii strain Hab-5]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATCGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAGGTCAGCCGG
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCAGGCTGTTAGGCCTTCAGGAAATTATTGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAGGATTTGCGGCAAGTCGGATTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTTATGATGAGATCCGAATTAATCGAACGAATCTTTCGCGACCGGG
GGACTGAAGACGGTTTTCAGGAAATTAAAAATCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACGCTGAGAAAATATCTTTATACAACCGAGGAGTA
CAACGGAAAGGTCAAAATACATTTTCAGTGCATCGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
ATCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGATTTGCTTGAGGGGACTATTACGATAGACTCTAAAATAGGTCTTG
GGACATTCATCATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959