Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RAS18_RS02215 Genome accession   NZ_CP136635
Coordinates   448445..449395 (+) Length   316 a.a.
NCBI ID   WP_061572374.1    Uniprot ID   -
Organism   Bacillus atrophaeus subsp. globigii strain Hab-5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 443445..454395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAS18_RS02190 - 443907..444822 (+) 916 Protein_398 IS3 family transposase -
  RAS18_RS02195 rapC 445050..446198 (+) 1149 WP_406621340.1 tetratricopeptide repeat protein Regulator
  RAS18_RS02200 phrC 446182..446301 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  RAS18_RS02205 - 446435..446542 (-) 108 WP_082786775.1 YjcZ family sporulation protein -
  RAS18_RS02210 - 446649..448013 (-) 1365 WP_406621342.1 aspartate kinase -
  RAS18_RS02215 ceuB 448445..449395 (+) 951 WP_061572374.1 ABC transporter permease Machinery gene
  RAS18_RS02220 - 449388..450335 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -
  RAS18_RS02225 - 450329..451087 (+) 759 WP_406621343.1 ABC transporter ATP-binding protein -
  RAS18_RS02230 - 451109..452062 (+) 954 WP_061572372.1 siderophore ABC transporter substrate-binding protein -
  RAS18_RS02235 - 452369..453787 (-) 1419 WP_214917295.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34997.53 Da        Isoelectric Point: 9.8314

>NTDB_id=892005 RAS18_RS02215 WP_061572374.1 448445..449395(+) (ceuB) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDLFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLYLSIPLVIIAYIFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGIIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=892005 RAS18_RS02215 WP_061572374.1 448445..449395(+) (ceuB) [Bacillus atrophaeus subsp. globigii strain Hab-5]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATCTTTTTCATATGAATAAAGAAGAGGCTTCAACGCTTTTCGCCAGCCGTTTGCCGAGATTAATCAGCATTATTA
TTGCAGGCATGAGCCTGAGCATCTGCGGCTTAATTATGCAGCAGATCAGCCGTAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATCCTTGAGAGAATAAAGTTTAACGATACGATCT
TTATCCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACATTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGATTTTTCTCTCATTGTGAAAGGGAGATATGAACTTTTATACTTGAGTATCCC
GCTTGTGATAATCGCATATATATTTGCTGACAAATTCACAGTAGCAGGGATGGGGGAAAGCTTCTCCGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTAATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTAAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGTGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATCATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528