Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   AAEU35_RS05220 Genome accession   NZ_CP152294
Coordinates   1078321..1079103 (-) Length   260 a.a.
NCBI ID   WP_023188991.1    Uniprot ID   -
Organism   Lactococcus lactis strain Q13     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1073321..1084103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEU35_RS05190 - 1073626..1074615 (-) 990 WP_029344853.1 mevalonate kinase -
  AAEU35_RS05195 mvaD 1074602..1075558 (-) 957 WP_058212449.1 diphosphomevalonate decarboxylase -
  AAEU35_RS05200 mvk 1075864..1076796 (+) 933 WP_003131564.1 mevalonate kinase -
  AAEU35_RS05205 - 1076859..1077050 (+) 192 WP_317141441.1 hypothetical protein -
  AAEU35_RS05210 rsmI 1077127..1078002 (-) 876 WP_058204088.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AAEU35_RS05215 yabA 1078002..1078328 (-) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  AAEU35_RS05220 yaaT 1078321..1079103 (-) 783 WP_023188991.1 stage 0 sporulation family protein Regulator
  AAEU35_RS05225 - 1079155..1080015 (-) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  AAEU35_RS05230 tmk 1080148..1080783 (-) 636 WP_012897230.1 dTMP kinase -
  AAEU35_RS05235 yycF 1080961..1081662 (+) 702 WP_003131580.1 response regulator YycF -
  AAEU35_RS05240 vicK 1081655..1083097 (+) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  AAEU35_RS05245 vicX 1083266..1084078 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29817.30 Da        Isoelectric Point: 6.0566

>NTDB_id=891802 AAEU35_RS05220 WP_023188991.1 1078321..1079103(-) (yaaT) [Lactococcus lactis strain Q13]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=891802 AAEU35_RS05220 WP_023188991.1 1078321..1079103(-) (yaaT) [Lactococcus lactis strain Q13]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385