Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RYH70_RS00350 Genome accession   NZ_CP136538
Coordinates   75905..76288 (-) Length   127 a.a.
NCBI ID   WP_014992438.1    Uniprot ID   A0A9Q3ZGJ2
Organism   Alloalcanivorax xenomutans strain GOM8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 70905..81288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYH70_RS00330 (RYH70_00330) - 71790..72665 (-) 876 WP_022997458.1 protein-glutamate O-methyltransferase CheR -
  RYH70_RS00335 (RYH70_00335) - 72665..74683 (-) 2019 WP_233924767.1 methyl-accepting chemotaxis protein -
  RYH70_RS00340 (RYH70_00340) - 74927..75475 (-) 549 WP_022997460.1 chemotaxis protein CheW -
  RYH70_RS00345 (RYH70_00345) pilH 75490..75858 (-) 369 WP_022997461.1 twitching motility response regulator PilH -
  RYH70_RS00350 (RYH70_00350) pilG 75905..76288 (-) 384 WP_014992438.1 twitching motility response regulator PilG Regulator
  RYH70_RS00355 (RYH70_00355) gshB 76521..77474 (+) 954 WP_080530118.1 glutathione synthase -
  RYH70_RS00360 (RYH70_00360) - 77565..78431 (+) 867 WP_022997463.1 energy transducer TonB -
  RYH70_RS00365 (RYH70_00365) - 78485..79048 (+) 564 WP_022997464.1 YqgE/AlgH family protein -
  RYH70_RS00370 (RYH70_00370) ruvX 79048..79452 (+) 405 WP_026948831.1 Holliday junction resolvase RuvX -
  RYH70_RS00375 (RYH70_00375) - 79502..80104 (-) 603 WP_022997466.1 DUF2780 domain-containing protein -
  RYH70_RS00380 (RYH70_00380) pyrR 80262..80789 (+) 528 WP_022997467.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14071.38 Da        Isoelectric Point: 8.4918

>NTDB_id=891453 RYH70_RS00350 WP_014992438.1 75905..76288(-) (pilG) [Alloalcanivorax xenomutans strain GOM8]
MTDNFQDLKVMVIDDSKTIRRTAETLLKKAGCEVITATDGFDALAKIADSKPRIIFVDIMMPRLDGYQTCALIKNNSAFK
QTPVIMLSSKDGLFDKAKGRIVGSDEYLTKPFSKDELLGAIRQHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=891453 RYH70_RS00350 WP_014992438.1 75905..76288(-) (pilG) [Alloalcanivorax xenomutans strain GOM8]
ATGACTGACAATTTTCAAGACCTCAAGGTCATGGTGATCGACGATTCGAAAACCATTCGTCGTACCGCCGAGACCTTGTT
GAAGAAAGCGGGTTGTGAGGTGATTACCGCCACCGACGGGTTCGATGCGCTTGCCAAGATTGCCGACAGCAAGCCGCGAA
TCATTTTCGTGGACATCATGATGCCCCGGCTGGATGGCTATCAGACGTGCGCCTTGATCAAGAACAACAGCGCGTTCAAG
CAGACACCGGTGATCATGCTCTCCTCGAAGGACGGCTTGTTCGATAAGGCCAAGGGCCGCATCGTGGGATCCGATGAATA
CCTGACCAAGCCTTTTTCCAAGGACGAGCTACTGGGCGCCATCCGTCAGCATATCAGCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.74

100

0.787
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37