Detailed information NTG0891063

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RYX39_RS18130
• Genome accession: NZ_CP136430
• Coordinates: 3528737..3529894 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain Q2H2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3523737..3534894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYX39_RS18100 (RYX39_18100)	-	3523990..3524409 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
RYX39_RS18105 (RYX39_18105)	comFC	3524483..3525205 (-)	723	WP_127696434.1	phosphoribosyltransferase family protein	Machinery gene
RYX39_RS18110 (RYX39_18110)	-	3525169..3525465 (-)	297	WP_024123028.1	late competence development ComFB family protein	-
RYX39_RS18115 (RYX39_18115)	comFA	3525522..3526916 (-)	1395	WP_316961118.1	ATP-dependent helicase ComFA	Machinery gene
RYX39_RS18120 (RYX39_18120)	-	3527023..3527868 (-)	846	WP_106019639.1	DegV family protein	-
RYX39_RS18125 (RYX39_18125)	degU	3527965..3528654 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RYX39_RS18130 (RYX39_18130)	degS	3528737..3529894 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
RYX39_RS18135 (RYX39_18135)	-	3530111..3530764 (+)	654	WP_044159478.1	YigZ family protein	-
RYX39_RS18140 (RYX39_18140)	-	3530764..3531942 (+)	1179	WP_024123032.1	LCP family protein	-
RYX39_RS18145 (RYX39_18145)	-	3532014..3533090 (-)	1077	WP_010332075.1	glycosyltransferase family 4 protein	-
RYX39_RS18150 (RYX39_18150)	-	3533234..3534424 (-)	1191	WP_106019940.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=891063 RYX39_RS18130 WP_024123030.1 3528737..3529894(-) (degS) [Bacillus halotolerans strain Q2H2]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=891063 RYX39_RS18130 WP_024123030.1 3528737..3529894(-) (degS) [Bacillus halotolerans strain Q2H2]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAACGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGCCTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCTGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCATGATGGCCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTCAGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGGACCATGACTATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992