Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | OCU38_RS00970 | Genome accession | NZ_AP024885 |
| Coordinates | 207156..207788 (-) | Length | 210 a.a. |
| NCBI ID | WP_017029447.1 | Uniprot ID | V5FDW9 |
| Organism | Vibrio neonatus strain JCM 21521 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 202156..212788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCU38_RS00950 | - | 202471..203679 (+) | 1209 | WP_261823451.1 | aspartate aminotransferase family protein | - |
| OCU38_RS00955 | astA | 203704..204723 (+) | 1020 | WP_261823452.1 | arginine N-succinyltransferase | - |
| OCU38_RS00960 | astD | 204747..206210 (+) | 1464 | WP_261823453.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| OCU38_RS00965 | - | 206271..207068 (+) | 798 | WP_261823454.1 | DUF1338 domain-containing protein | - |
| OCU38_RS00970 | crp | 207156..207788 (-) | 633 | WP_017029447.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| OCU38_RS00975 | - | 208012..208881 (-) | 870 | WP_023402448.1 | phosphoribulokinase | - |
| OCU38_RS00980 | - | 208947..209168 (-) | 222 | WP_023402449.1 | YheU family protein | - |
| OCU38_RS00985 | - | 209187..210167 (-) | 981 | WP_261823455.1 | hydrolase | - |
| OCU38_RS00990 | - | 210160..210624 (-) | 465 | WP_261823456.1 | TIGR02444 family protein | - |
| OCU38_RS00995 | - | 210631..212550 (-) | 1920 | WP_261823457.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23625.36 Da Isoelectric Point: 7.4009
>NTDB_id=89100 OCU38_RS00970 WP_017029447.1 207156..207788(-) (crp) [Vibrio neonatus strain JCM 21521]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEDD
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSSQMANRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEDD
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSSQMANRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=89100 OCU38_RS00970 WP_017029447.1 207156..207788(-) (crp) [Vibrio neonatus strain JCM 21521]
ATGGTTTTAGGTAAACCTCAAACAGATCCAACTTTAGAGTGGTTTTTGTCACATTGCCACATCCACAAATACCCTTCAAA
AAGCACATTGATCCACGCTGGCGAAAAAGCGGAAACTCTTTACTACATCGTAAAAGGTTCTGTAGCAGTACTGATTAAAG
ATGAAGAAGGGAAAGAAATGATTCTTTCTTACCTTAACCAAGGTGATTTCATCGGTGAGCTAGGTCTTTTTGAAGATGAT
CAAGAGCGTACCGCATGGGTTCGTGCTAAATCTCCATGTGAGGTTGCTGAAATCTCATTCAAGAAATTCCGTCAGCTAAT
CCAAGTTAATCCAGACATCCTAATGCGTCTTTCTTCGCAAATGGCTAACCGTCTGCAAGTGACAAGTCAAAAAGTAGGTG
ACCTTGCGTTCCTAGACGTGACTGGTCGTATTGCTCAGACTCTGCTTAACCTTGCAAAACAACCTGACGCAATGACTCAC
CCAGACGGCATGCAAATTAAGATCACTCGTCAAGAAATTGGCCAGATCGTAGGTTGTTCTCGTGAGACTGTAGGTCGTAT
CTTGAAGATGCTTGAAGAGCAAAACCTGATTTCTGCACACGGTAAAACTATTGTGGTTTACGGTACTCGTTAA
ATGGTTTTAGGTAAACCTCAAACAGATCCAACTTTAGAGTGGTTTTTGTCACATTGCCACATCCACAAATACCCTTCAAA
AAGCACATTGATCCACGCTGGCGAAAAAGCGGAAACTCTTTACTACATCGTAAAAGGTTCTGTAGCAGTACTGATTAAAG
ATGAAGAAGGGAAAGAAATGATTCTTTCTTACCTTAACCAAGGTGATTTCATCGGTGAGCTAGGTCTTTTTGAAGATGAT
CAAGAGCGTACCGCATGGGTTCGTGCTAAATCTCCATGTGAGGTTGCTGAAATCTCATTCAAGAAATTCCGTCAGCTAAT
CCAAGTTAATCCAGACATCCTAATGCGTCTTTCTTCGCAAATGGCTAACCGTCTGCAAGTGACAAGTCAAAAAGTAGGTG
ACCTTGCGTTCCTAGACGTGACTGGTCGTATTGCTCAGACTCTGCTTAACCTTGCAAAACAACCTGACGCAATGACTCAC
CCAGACGGCATGCAAATTAAGATCACTCGTCAAGAAATTGGCCAGATCGTAGGTTGTTCTCGTGAGACTGTAGGTCGTAT
CTTGAAGATGCTTGAAGAGCAAAACCTGATTTCTGCACACGGTAAAACTATTGTGGTTTACGGTACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
97.143 |
100 |
0.971 |
| crp | Haemophilus influenzae Rd KW20 |
74.02 |
97.143 |
0.719 |
| crp | Acinetobacter baumannii D1279779 |
46.86 |
98.571 |
0.462 |