Detailed information NTG0890200

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: RX144_RS04310
• Genome accession: NZ_CP136351
• Coordinates: 869546..870073 (+)
• Length: 175 a.a.
• NCBI ID: WP_021732903.1
• Uniprot ID: -
• Organism: Enterococcus faecalis strain ES-1348
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 864546..875073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RX144_RS04265 (RX144_04265)	-	864836..865549 (+)	714	WP_002406300.1	phage regulatory protein	-
RX144_RS04270 (RX144_04270)	-	865560..865745 (+)	186	WP_002357337.1	hypothetical protein	-
RX144_RS04275 (RX144_04275)	-	865757..865930 (+)	174	WP_174129540.1	hypothetical protein	-
RX144_RS04280 (RX144_04280)	-	866129..866251 (+)	123	WP_002414628.1	hypothetical protein	-
RX144_RS04285 (RX144_04285)	-	866235..866714 (+)	480	WP_002381628.1	siphovirus Gp157 family protein	-
RX144_RS04290 (RX144_04290)	-	866726..867742 (+)	1017	WP_002365157.1	AAA family ATPase	-
RX144_RS04295 (RX144_04295)	-	867747..868388 (+)	642	WP_002414632.1	putative HNHc nuclease	-
RX144_RS04300 (RX144_04300)	-	868392..869243 (+)	852	WP_250869349.1	helix-turn-helix domain-containing protein	-
RX144_RS04305 (RX144_04305)	-	869248..869556 (+)	309	WP_010822654.1	MazG-like family protein	-
RX144_RS04310 (RX144_04310)	ssb	869546..870073 (+)	528	WP_021732903.1	single-stranded DNA-binding protein	Machinery gene
RX144_RS04315 (RX144_04315)	-	870085..870414 (+)	330	WP_015543839.1	hypothetical protein	-
RX144_RS04320 (RX144_04320)	-	870434..870640 (+)	207	WP_002395813.1	hypothetical protein	-
RX144_RS04325 (RX144_04325)	-	870693..872009 (+)	1317	WP_021732910.1	N-6 DNA methylase	-
RX144_RS04330 (RX144_04330)	-	872006..872446 (+)	441	WP_002370000.1	restriction endonuclease subunit S	-
RX144_RS04335 (RX144_04335)	-	872469..872876 (+)	408	WP_033624388.1	YopX family protein	-
RX144_RS04340 (RX144_04340)	-	872873..873232 (+)	360	WP_002406171.1	hypothetical protein	-
RX144_RS04345 (RX144_04345)	-	873233..873511 (+)	279	WP_002406172.1	hypothetical protein	-
RX144_RS04350 (RX144_04350)	-	873523..873741 (+)	219	WP_005876792.1	hypothetical protein	-
RX144_RS04355 (RX144_04355)	-	873738..873920 (+)	183	WP_002403753.1	hypothetical protein	-
RX144_RS14560	-	873934..874674 (+)	741	WP_021732919.1	DUF1642 domain-containing protein	-
RX144_RS04370 (RX144_04370)	-	874857..875063 (+)	207	WP_021732920.1	hypothetical protein	-

Sequence

Protein

• Length: 175 a.a.
• Molecular weight: 19369.24 Da
• Isoelectric Point: 4.5778

>NTDB_id=890200 RX144_RS04310 WP_021732903.1 869546..870073(+) (ssb) [Enterococcus faecalis strain ES-1348]
MINNVVLVGRLTKDPDLRYTASGSAVGSFTLAVNRNFTNQNGEREADFINCVIWRKPAETMANYTRKGTLLGVVGRIQTR
NYDNQQGQRVYVTEVVCESFQLLEPKSANENRNSIQMSQNDGTSVQNNFEGNYATNQNKGLNQQNNSQQMSFGGDVDPFA
GAGNSIDISDDDLPF

Nucleotide

• Length: 528 bp

>NTDB_id=890200 RX144_RS04310 WP_021732903.1 869546..870073(+) (ssb) [Enterococcus faecalis strain ES-1348]
ATGATAAATAATGTGGTATTAGTCGGAAGATTGACAAAAGATCCTGATTTACGCTACACCGCAAGTGGTTCTGCAGTTGG
AAGCTTTACTCTTGCTGTGAACCGTAACTTTACAAACCAAAACGGCGAACGAGAAGCGGATTTTATCAACTGTGTAATTT
GGCGTAAGCCTGCTGAAACAATGGCTAATTATACTCGTAAAGGAACATTATTAGGAGTTGTTGGCAGAATTCAAACTCGT
AATTATGACAACCAACAAGGCCAACGTGTCTATGTGACTGAAGTTGTTTGCGAGAGTTTCCAATTATTAGAGCCAAAAAG
CGCCAATGAGAATAGAAATAGCATTCAGATGTCACAGAATGACGGTACAAGCGTTCAAAACAATTTCGAGGGTAATTATG
CCACGAATCAAAACAAAGGCTTAAATCAGCAAAATAACAGCCAACAAATGTCGTTTGGTGGAGATGTAGATCCGTTCGCA
GGTGCAGGTAATTCAATCGACATTAGCGATGATGATCTGCCTTTTTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Latilactobacillus sakei subsp. sakei 23K	57.979	100	0.623
ssbA	Bacillus subtilis subsp. subtilis str. 168	58.286	100	0.583
ssbB	Bacillus subtilis subsp. subtilis str. 168	60.377	60.571	0.366