Detailed information NTG0889989

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RX793_RS12185
• Genome accession: NZ_CP136263
• Coordinates: 2554078..2555241 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 0039
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2549078..2560241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RX793_RS12165 (RX793_12160)	tuaH	2549494..2550690 (+)	1197	WP_024085869.1	teichuronic acid biosynthesis protein TuaH	-
RX793_RS12170 (RX793_12165)	-	2550823..2551899 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
RX793_RS12175 (RX793_12170)	-	2551989..2553203 (-)	1215	WP_024085868.1	LCP family protein	-
RX793_RS12180 (RX793_12175)	-	2553208..2553855 (-)	648	WP_003151384.1	YigZ family protein	-
RX793_RS12185 (RX793_12180)	degS	2554078..2555241 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
RX793_RS12190 (RX793_12185)	degU	2555318..2556007 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RX793_RS12195 (RX793_12190)	-	2556105..2556953 (+)	849	WP_024085866.1	DegV family protein	-
RX793_RS12200 (RX793_12195)	comFA	2557061..2558446 (+)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
RX793_RS12205 (RX793_12200)	-	2558504..2558788 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
RX793_RS12210 (RX793_12205)	comFC	2558794..2559483 (+)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
RX793_RS12215 (RX793_12210)	-	2559557..2559976 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=889989 RX793_RS12185 WP_003151385.1 2554078..2555241(+) (degS) [Bacillus velezensis strain 0039]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=889989 RX793_RS12185 WP_003151385.1 2554078..2555241(+) (degS) [Bacillus velezensis strain 0039]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948