Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RX793_RS07545 Genome accession   NZ_CP136263
Coordinates   1613110..1614063 (-) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus velezensis strain 0039     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1608110..1619063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RX793_RS07525 (RX793_07520) - 1608992..1610413 (+) 1422 WP_014304342.1 MDR family MFS transporter -
  RX793_RS07530 (RX793_07525) - 1610455..1611399 (-) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  RX793_RS07535 (RX793_07530) - 1611421..1612179 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  RX793_RS07540 (RX793_07535) - 1612173..1613120 (-) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  RX793_RS07545 (RX793_07540) ceuB 1613110..1614063 (-) 954 WP_003156332.1 ABC transporter permease Machinery gene
  RX793_RS07550 (RX793_07545) - 1614478..1615842 (+) 1365 WP_003156333.1 aspartate kinase -
  RX793_RS07555 (RX793_07550) - 1615922..1616032 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  RX793_RS07560 (RX793_07555) phrC 1616182..1616301 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  RX793_RS07565 (RX793_07560) rapC 1616285..1617433 (-) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  RX793_RS07570 (RX793_07565) - 1617586..1619019 (-) 1434 WP_161625271.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=889971 RX793_RS07545 WP_003156332.1 1613110..1614063(-) (ceuB) [Bacillus velezensis strain 0039]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=889971 RX793_RS07545 WP_003156332.1 1613110..1614063(-) (ceuB) [Bacillus velezensis strain 0039]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGCCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTTAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533