Detailed information NTG0889358

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AAE282_RS15050
• Genome accession: NZ_CP151685
• Coordinates: 2835767..2836372 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain YB-187
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2830767..2841372

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAE282_RS15020 (AAE282_15020)	-	2831580..2831969 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
AAE282_RS15025 (AAE282_15025)	yajC	2832026..2832292 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AAE282_RS15030 (AAE282_15030)	tgt	2832329..2833474 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AAE282_RS15035 (AAE282_15035)	queA	2833501..2834529 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AAE282_RS15040 (AAE282_15040)	yrzS	2834559..2834759 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AAE282_RS15045 (AAE282_15045)	ruvB	2834752..2835756 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AAE282_RS15050 (AAE282_15050)	ruvA	2835767..2836372 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AAE282_RS15055 (AAE282_15055)	bofC	2836511..2837023 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
AAE282_RS15060 (AAE282_15060)	csbX	2837071..2838378 (-)	1308	WP_003246197.1	MFS transporter	-
AAE282_RS15065 (AAE282_15065)	iolG	2838449..2839474 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
AAE282_RS15070 (AAE282_15070)	yrzF	2839712..2840359 (+)	648	WP_003246159.1	phosphotransferase	-
AAE282_RS15075 (AAE282_15075)	-	2840405..2840527 (-)	123	WP_003229707.1	hypothetical protein	-
AAE282_RS15080 (AAE282_15080)	yrzH	2840612..2840902 (+)	291	WP_003246047.1	DUF5412 family protein	-
AAE282_RS15085 (AAE282_15085)	-	2840909..2841049 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=889358 AAE282_RS15050 WP_003229717.1 2835767..2836372(-) (ruvA) [Bacillus subtilis strain YB-187]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=889358 AAE282_RS15050 WP_003229717.1 2835767..2836372(-) (ruvA) [Bacillus subtilis strain YB-187]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408