NTDB

Overview

Name	recG	Type	Machinery gene
Locus tag	AAEY34_RS28740	Genome accession	NZ_CP151647
Coordinates	6176852..6178927 (+)	Length	691 a.a.
NCBI ID	WP_003096624.1	Uniprot ID	A0A0H2ZJ60
Organism	Pseudomonas aeruginosa strain HN148
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6171852..6183927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAEY34_RS28710 (AAEY34_28710)	-	6172274..6172654 (+)	381	WP_003096609.1	RidA family protein	-
AAEY34_RS28715 (AAEY34_28715)	-	6172709..6173440 (+)	732	WP_003096611.1	hypothetical protein	-
AAEY34_RS28720 (AAEY34_28720)	-	6173447..6174067 (-)	621	WP_003096613.1	LysE family translocator	-
AAEY34_RS28725 (AAEY34_28725)	-	6174134..6174934 (-)	801	WP_003114367.1	AraC family transcriptional regulator	-
AAEY34_RS28730 (AAEY34_28730)	-	6174934..6175785 (-)	852	WP_003121310.1	SDR family oxidoreductase	-
AAEY34_RS28735 (AAEY34_28735)	oxyR	6175923..6176855 (+)	933	WP_003096622.1	oxidative stress transcriptional regulator OxyR	-
AAEY34_RS28740 (AAEY34_28740)	recG	6176852..6178927 (+)	2076	WP_003096624.1	ATP-dependent DNA helicase RecG	Machinery gene
AAEY34_RS28745 (AAEY34_28745)	-	6179017..6180426 (+)	1410	WP_003098324.1	HDOD domain-containing protein	-
AAEY34_RS28750 (AAEY34_28750)	-	6180498..6180890 (-)	393	WP_003096629.1	hypothetical protein	-
AAEY34_RS28755 (AAEY34_28755)	-	6181026..6181358 (-)	333	WP_167755396.1	HU family DNA-binding protein	-
AAEY34_RS28760 (AAEY34_28760)	alkT	6181500..6182654 (-)	1155	WP_119565276.1	rubredoxin-NAD(+) reductase AlkT	-
AAEY34_RS28765 (AAEY34_28765)	-	6182706..6182873 (-)	168	WP_003098329.1	rubredoxin	-
AAEY34_RS28770 (AAEY34_28770)	-	6183057..6183224 (-)	168	WP_003098330.1	rubredoxin	-
AAEY34_RS28775 (AAEY34_28775)	-	6183358..6183759 (-)	402	WP_003098332.1	heme-binding protein	-

Sequence

Protein

Download Length: 691 a.a. Molecular weight: 76178.88 Da Isoelectric Point: 7.2591

                                >NTDB_id=889234 AAEY34_RS28740 WP_003096624.1 6176852..6178927(+) (recG) [Pseudomonas aeruginosa strain HN148]

MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQDRTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLL

VRLQDGSGTLSLRFYHFSQAQKDGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR

LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAEGRHWAQLRLAFEELLTHQLSLQRLR

EAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQV

ALMAPTEILAEQHFLNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLALAIIDEQHR

FGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRIEVIERVRAACRE

GRQAYWVCTLIEESEELTCQAAETTYEELSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNA

SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKDLELRGPGEMLGTRQTG

LLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWLRHGQQYGQV

Nucleotide

Download Length: 2076 bp

                                >NTDB_id=889234 AAEY34_RS28740 WP_003096624.1 6176852..6178927(+) (recG) [Pseudomonas aeruginosa strain HN148]

ATGACCGAGCTGTCCAGGGTCCCGGTCACCGCGCTAAAGGGCGTAGGCGCCGCGCTGGCGGAGAAGCTCGCTCGGGTAGG

CCTGGAAACCCTGCAGGACATCCTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACCCGCGTCACCGCCATCGGCGCCC

TGCGGCCAGGGGCCGACGCGGTGGTCGAGGGCGTGGTGGCCGGCGCCGACGTGGTGATGGGGCGCCGCCGCAGCCTGCTG

GTGCGCCTACAGGACGGCAGCGGCACCCTGAGCCTGCGCTTCTACCATTTCAGCCAGGCGCAGAAGGACGGCCTCAAGCG

CGGCACCCACCTGCGCTGCTACGGCGAAGTCCGGCCGGGCGCCTCGGGCCTGGAGATCTACCATCCGGAATACCGCGCGC

TGAACGGCGACGAGCCGATTCCGGTGGAGCAGACCCTGACGCCGATCTACCCGACTACCGAGGGCCTCACCCAGCAGCGC

CTGCGCCAGTTGAGCCAACAGGCCCTGGCCATGCTCGGTCCCAGCAGCCTGCCCGACTGGCTGCCGGCGGAACTGGCCCG

CGATTACCAACTTGGCCCGCTCGACCAGGCGATCCGCTACCTGCACCGGCCGCCGCCGGATGCCGACATCGAGGAACTGG

CCGAAGGCCGGCACTGGGCGCAGTTGCGCCTGGCCTTCGAAGAACTGCTGACCCACCAGTTATCCCTGCAGCGCCTGCGC

GAAGCCGTGCGTTCGCAGGCAGCGCCGCGCTTGCCGGCGGCCAGCCGCTTGCCGAAACGCTTCCTTGCCAACCTCGGCTT

CCAGCCGACCGGCGCGCAACGCCGGGTCGGCGCGGAGATCGCCTACGACCTGGCCCAGGACGAACCGATGCTGCGCCTGG

TGCAAGGCGACGTCGGCGCCGGCAAGACCGTGGTCGCCGCCCTCGCCGCCCTGCAAGCCATAGAGGCCGGTTACCAGGTG

GCGCTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCATTTCCTCAACTTCAGCAAGTGGCTCCAGCCGCTGGACATCGA

AGTCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCGGCGGCACTGGAACGCATCGGCGACGGCGCGCCGATGG

TGGTCGGCACCCACGCGCTGTTCCAGGATGAAGTGAAATTCAAGCGCCTTGCACTGGCGATCATCGACGAACAGCACCGC

TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGCGTGGACGGCAGGCTCTGCCCACACCAGTTGATCATGACCGC

CACGCCGATCCCGCGGACCCTGGCGATGAGCGCCTATGCCGACCTCGACACCTCGATCCTAGACGAGCTGCCGCCCGGGC

GTACCCCGGTGAATACCGTGCTGGTGGCCGACAGCCGCCGTATCGAGGTGATCGAGCGAGTCCGCGCGGCTTGCCGCGAA

GGGCGCCAGGCCTACTGGGTGTGCACTCTGATCGAAGAGTCCGAGGAGCTTACCTGCCAGGCCGCCGAGACCACCTACGA

AGAGCTTTCCTCGGCGCTGGGCGAACTGCGCGTCGGCCTGATCCACGGGCGCATGAAGCCGGCGGACAAGGCCGTGGTGA

TGGAAGCCTTCAAGGAAGGCATGTTGCAACTGCTGGTGGCGACCACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCC

AGCCTGATGATCATCGAGAACCCCGAGCGCCTTGGCCTGGCCCAACTGCACCAGTTGCGCGGCCGGGTTGGCCGGGGCAG

CGCCGCCAGCCACTGCGTGCTGCTCTACCACCCACCGCTGTCGCAGATCGGCCGCGAGCGGCTGGGCATCATGCGCGAAA

CCAGCGACGGCTTCGTCATCGCCGAGAAGGACCTGGAATTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAAACCGGC

CTGCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTGCCGGCGGTCCGCGATGCCGCCCAATCCCTCCT

GGCGCACTGGCCGCAGCATGTCAGCCCGCTGCTCGAACGGTGGTTGCGCCACGGCCAGCAATACGGTCAAGTGTGA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(293-430)

Helicase conserved C-terminal domain (Helicase_C)

(479-586)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(614-675)

RecG wedge domain (RecG_wedge)

(12-170)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZJ60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
recG	Neisseria meningitidis strain C311	50.373	97.106	0.489
recG/mmsA	Streptococcus pneumoniae R6	40.868	96.671	0.395
recG/mmsA	Streptococcus pneumoniae R36A	40.868	96.671	0.395
recG	Bacillus subtilis subsp. subtilis str. 168	40.356	97.54	0.394

Detailed information NTG0889234