Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   F6I35_RS08765 Genome accession   NZ_CP136160
Coordinates   1669228..1671207 (-) Length   659 a.a.
NCBI ID   WP_024052701.1    Uniprot ID   A0A412PMS0
Organism   Streptococcus anginosus strain UMB8616     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1664228..1676207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS08745 (F6I35_0008740) amiF 1664419..1665342 (-) 924 WP_024052698.1 ATP-binding cassette domain-containing protein Regulator
  F6I35_RS08750 (F6I35_0008745) amiE 1665353..1666420 (-) 1068 WP_003026176.1 ABC transporter ATP-binding protein Regulator
  F6I35_RS08755 (F6I35_0008750) amiD 1666429..1667355 (-) 927 WP_024052699.1 oligopeptide ABC transporter permease OppC Regulator
  F6I35_RS08760 (F6I35_0008755) amiC 1667355..1668851 (-) 1497 WP_024052700.1 ABC transporter permease Regulator
  F6I35_RS08765 (F6I35_0008760) amiA3 1669228..1671207 (-) 1980 WP_024052701.1 peptide ABC transporter substrate-binding protein Regulator
  F6I35_RS08770 (F6I35_0008765) amiA3 1671405..1673381 (-) 1977 WP_024052702.1 peptide ABC transporter substrate-binding protein Regulator
  F6I35_RS08775 (F6I35_0008770) - 1673548..1674234 (-) 687 WP_070241965.1 B3/4 domain-containing protein -
  F6I35_RS08780 (F6I35_0008775) - 1674397..1676007 (-) 1611 WP_101750424.1 CTP synthase -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73164.77 Da        Isoelectric Point: 7.8680

>NTDB_id=888980 F6I35_RS08765 WP_024052701.1 1669228..1671207(-) (amiA3) [Streptococcus anginosus strain UMB8616]
MKKSKIITLAALALLATGALAACSGSKTSSGNKTFSYIYEQDPDNLNYLTTGKAATANLTSNAIDGLLENDRYGNLVPSV
AKDWTVSKDGLTYTYTLRKGVKWYTSEGEEYAEVKAQDFVTGLKYAADNKSEAIYLVQDSIKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKNNIVYTPQDATTYLVATNIDRQSYKHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKSFGELVKEKLVGYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETNN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFSNAFAWSGTKGNSETILYKYLEIQDEPVTQNQYKKAMEKWN
KKRTESNKKAQEELADHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=888980 F6I35_RS08765 WP_024052701.1 1669228..1671207(-) (amiA3) [Streptococcus anginosus strain UMB8616]
ATGAAGAAAAGTAAAATCATTACCCTTGCAGCGCTAGCCTTGCTTGCAACAGGAGCTCTAGCAGCTTGTTCTGGCTCTAA
AACAAGCTCGGGGAACAAAACATTCTCATATATTTATGAGCAAGATCCAGATAACCTGAACTATTTGACAACTGGGAAAG
CAGCCACTGCAAATCTTACCAGTAATGCCATTGACGGACTCTTGGAAAATGACCGTTACGGAAATCTAGTTCCTTCTGTA
GCGAAGGATTGGACAGTCTCCAAGGACGGCTTGACTTATACTTATACACTTCGTAAGGGTGTGAAATGGTACACATCAGA
GGGCGAAGAGTATGCAGAAGTTAAGGCACAAGACTTTGTGACAGGCTTAAAATATGCTGCGGATAATAAATCTGAAGCTA
TTTACTTGGTGCAAGATTCAATCAAAGGCTTGGATGCTTACATGAAGGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTTGATGATTACACGGTTCAATACACGCTTAATCGACCAGAAAGCTTTTGGAATTCTAAAACAACAATGGGCGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGACCCATCTAGTCTTCTTT
ATAATGGTCCATACTTGCTGAAATCTATCACAGCGAAATCATCTGTTGAATTTGCTAAAAATCCAAACTACTGGGATAAG
AAGAATGTGCACATTGACAACATCAAGTTGTCCTACTATGATGGTCAAGACCAAGACAAACTTGCTAAAGGATTTAGTGA
TGGCTCATTTACCAATGCCAAAGTATTTCCAACAAGTCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAAACAACATCG
TTTATACTCCGCAAGATGCAACGACTTACCTAGTAGCTACAAACATTGACCGTCAATCTTACAAACATACTTCAAAGACA
ACAGATGCTCAAAAGACTTCTACTAAGAAAGCTTTGCTAAACAAGGATTTCCGTCAAGCGATTACCTTTGCATTTGACCG
CACAGCTTATGCATCACAGGTGAATGGTAAAGACGGTGCGACGAAGATGCTCCGTAATCTCTTTGTACCGCCAACATTTG
TTCAAACAGATGACAAGAGCTTTGGAGAATTGGTCAAAGAAAAATTAGTTGGTTATGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGATGGTCTTTACAATCCAACTAAAGCTAAAGAAAAATTAGCGAAAGCGAAAGCAGCGCTTCAAGC
AGACGGTGTTCAATTCCCAATCCACATTGATATGCCAGTTGACCAAACAGCAACTAATAAAGTTCAACGTGTGCAATCAT
TGAAACAATCGATTGAAAAAAATCTTGGGAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGACGTGAAT
AATATCACTTACTTTGCCGAATCCGCAGCTGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGATTTCCA
AGACCCATCTACCTATCTTGATGTTATCAAACCTTCAAGCGGTGAAAGCACTAAGACTTATCTAGGATTTGATGCAGGCA
CGAACAACGCTGCTGCAGCACAAGTTGGTATGAACGAATATGAAAAGTTGTTGAATGAGGCTGAAAAAGAAACAAACAAT
ACGAATGCACGCTATGAAAAATATGCTGCAGCCCAAGCTTGGTTGACTGATAATGCATTGGTCATTCCAACAACAACACT
AACGGGTCGCCCAATTCTTTCTCGTACAGTACCATTTAGTAATGCCTTTGCTTGGTCAGGAACCAAGGGAAATAGTGAAA
CAATTCTCTATAAATACCTTGAAATCCAAGATGAGCCTGTGACTCAAAATCAATACAAGAAGGCCATGGAAAAATGGAAT
AAAAAGCGCACAGAGTCTAATAAAAAGGCTCAAGAAGAACTTGCAGATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PMS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

61.212

100

0.613
  amiA3 Streptococcus thermophilus LMG 18311

60.606

100

0.607
  amiA Streptococcus salivarius strain HSISS4

60.152

100

0.602