Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   F6I35_RS02180 Genome accession   NZ_CP136160
Coordinates   379475..380521 (+) Length   348 a.a.
NCBI ID   WP_024052173.1    Uniprot ID   A0A412PNT0
Organism   Streptococcus anginosus strain UMB8616     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 374475..385521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS02150 (F6I35_0002150) tsaE 375847..376287 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  F6I35_RS02155 (F6I35_0002155) - 376280..376801 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  F6I35_RS02160 (F6I35_0002160) brpA 376809..377924 (+) 1116 WP_070241538.1 biofilm formation/cell division transcriptional regulator BrpA -
  F6I35_RS02165 (F6I35_0002165) - 377971..378258 (-) 288 WP_024052176.1 hypothetical protein -
  F6I35_RS02170 (F6I35_0002170) - 378268..378678 (-) 411 WP_024052175.1 HIT family protein -
  F6I35_RS02175 (F6I35_0002175) pptA 378747..379478 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  F6I35_RS02180 (F6I35_0002180) pptB 379475..380521 (+) 1047 WP_024052173.1 ABC transporter permease Regulator
  F6I35_RS02185 (F6I35_0002185) ccrZ 380572..381369 (+) 798 WP_070241539.1 cell cycle regulator CcrZ -
  F6I35_RS02190 (F6I35_0002190) trmB 381366..382001 (+) 636 WP_070815202.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  F6I35_RS02200 (F6I35_0002200) - 382628..383317 (+) 690 WP_070815205.1 VIT family protein -
  F6I35_RS02205 (F6I35_0002205) rimP 383568..384056 (+) 489 WP_070815201.1 ribosome maturation factor RimP -
  F6I35_RS02210 (F6I35_0002210) nusA 384105..385298 (+) 1194 WP_042754019.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 41091.50 Da        Isoelectric Point: 10.4750

>NTDB_id=888943 F6I35_RS02180 WP_024052173.1 379475..380521(+) (pptB) [Streptococcus anginosus strain UMB8616]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWVLLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=888943 F6I35_RS02180 WP_024052173.1 379475..380521(+) (pptB) [Streptococcus anginosus strain UMB8616]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAATTTTCCTAAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTCTGTTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGTCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGTTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACTAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCCAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGCTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A412PNT0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.563

100

0.486

  pptB Streptococcus salivarius strain HSISS4

47.701

100

0.477