Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   F6I35_RS02175 Genome accession   NZ_CP136160
Coordinates   378747..379478 (+) Length   243 a.a.
NCBI ID   WP_024052174.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB8616     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 373747..384478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS02145 (F6I35_0002145) - 374321..375760 (+) 1440 WP_024052180.1 NCS2 family permease -
  F6I35_RS02150 (F6I35_0002150) tsaE 375847..376287 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  F6I35_RS02155 (F6I35_0002155) - 376280..376801 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  F6I35_RS02160 (F6I35_0002160) brpA 376809..377924 (+) 1116 WP_070241538.1 biofilm formation/cell division transcriptional regulator BrpA -
  F6I35_RS02165 (F6I35_0002165) - 377971..378258 (-) 288 WP_024052176.1 hypothetical protein -
  F6I35_RS02170 (F6I35_0002170) - 378268..378678 (-) 411 WP_024052175.1 HIT family protein -
  F6I35_RS02175 (F6I35_0002175) pptA 378747..379478 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  F6I35_RS02180 (F6I35_0002180) pptB 379475..380521 (+) 1047 WP_024052173.1 ABC transporter permease Regulator
  F6I35_RS02185 (F6I35_0002185) ccrZ 380572..381369 (+) 798 WP_070241539.1 cell cycle regulator CcrZ -
  F6I35_RS02190 (F6I35_0002190) trmB 381366..382001 (+) 636 WP_070815202.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  F6I35_RS02200 (F6I35_0002200) - 382628..383317 (+) 690 WP_070815205.1 VIT family protein -
  F6I35_RS02205 (F6I35_0002205) rimP 383568..384056 (+) 489 WP_070815201.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26900.57 Da        Isoelectric Point: 4.7336

>NTDB_id=888942 F6I35_RS02175 WP_024052174.1 378747..379478(+) (pptA) [Streptococcus anginosus strain UMB8616]
MLEIKGLIGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKVKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLVLTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=888942 F6I35_RS02175 WP_024052174.1 378747..379478(+) (pptA) [Streptococcus anginosus strain UMB8616]
ATGTTAGAAATAAAAGGGCTTATAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGTAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGTTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708
  pptA Streptococcus salivarius strain HSISS4

71.548

98.354

0.704