Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | RUI02_RS12360 | Genome accession | NZ_CP136099 |
| Coordinates | 2403038..2404075 (-) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus sp. TSA-4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2398038..2409075
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RUI02_RS12310 (RUI02_12310) | tasA | 2398135..2398920 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| RUI02_RS12315 (RUI02_12315) | sipW | 2398984..2399556 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| RUI02_RS12320 (RUI02_12320) | tapA | 2399540..2400301 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| RUI02_RS12325 (RUI02_12325) | - | 2400573..2400899 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| RUI02_RS12330 (RUI02_12330) | - | 2400941..2401120 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| RUI02_RS12335 (RUI02_12335) | comGG | 2401192..2401566 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| RUI02_RS12340 (RUI02_12340) | comGF | 2401567..2401950 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| RUI02_RS12345 (RUI02_12345) | comGE | 2401976..2402323 (-) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| RUI02_RS12350 (RUI02_12350) | comGD | 2402307..2402738 (-) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| RUI02_RS12355 (RUI02_12355) | comGC | 2402728..2403024 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| RUI02_RS12360 (RUI02_12360) | comGB | 2403038..2404075 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| RUI02_RS12365 (RUI02_12365) | comGA | 2404062..2405132 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| RUI02_RS12370 (RUI02_12370) | - | 2405344..2405541 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| RUI02_RS12375 (RUI02_12375) | corA | 2405543..2406496 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| RUI02_RS12380 (RUI02_12380) | - | 2406639..2407967 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| RUI02_RS12385 (RUI02_12385) | rsbRD | 2408020..2408856 (-) | 837 | WP_046381180.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=888419 RUI02_RS12360 WP_029317912.1 2403038..2404075(-) (comGB) [Bacillus sp. TSA-4]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=888419 RUI02_RS12360 WP_029317912.1 2403038..2404075(-) (comGB) [Bacillus sp. TSA-4]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |