Detailed information NTG0887853

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RUL31_RS18310
• Genome accession: NZ_CP135964
• Coordinates: 3707621..3708784 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain CD303
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3702621..3713784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RUL31_RS18280 (RUL31_18280)	-	3702872..3703291 (-)	420	WP_315915994.1	TIGR03826 family flagellar region protein	-
RUL31_RS18285 (RUL31_18285)	comFC	3703363..3704085 (-)	723	WP_390840846.1	double zinc ribbon domain-containing protein	Machinery gene
RUL31_RS18290 (RUL31_18290)	-	3704049..3704345 (-)	297	WP_003326719.1	late competence development ComFB family protein	-
RUL31_RS18295 (RUL31_18295)	comFA	3704402..3705799 (-)	1398	WP_315915995.1	ATP-dependent helicase ComFA	Machinery gene
RUL31_RS18300 (RUL31_18300)	-	3705906..3706748 (-)	843	WP_003326716.1	DegV family protein	-
RUL31_RS18305 (RUL31_18305)	degU	3706855..3707544 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RUL31_RS18310 (RUL31_18310)	degS	3707621..3708784 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
RUL31_RS18315 (RUL31_18315)	-	3709002..3709655 (+)	654	WP_003326713.1	YigZ family protein	-
RUL31_RS18320 (RUL31_18320)	-	3709655..3710878 (+)	1224	WP_315916036.1	LCP family protein	-
RUL31_RS18325 (RUL31_18325)	-	3710969..3712045 (-)	1077	WP_063638078.1	MraY family glycosyltransferase	-
RUL31_RS18330 (RUL31_18330)	-	3712186..3713376 (-)	1191	WP_087941797.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=887853 RUL31_RS18310 WP_003326714.1 3707621..3708784(-) (degS) [Bacillus atrophaeus strain CD303]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=887853 RUL31_RS18310 WP_003326714.1 3707621..3708784(-) (degS) [Bacillus atrophaeus strain CD303]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATCGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAAGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCAGGCTGTTAGGCCTTCAGGAAATTATAGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAGGATTTGCGGCAAGTCGGGTTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTGATGATGAGATCCGAATTAATCGAACGGATCTTTCGCGACCGGG
GAACTGAAGACGGTTTTCAGGAAATTAAAAACCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACGCTGAGAAAATATCTTTATACAACCGAGGAGTA
TAACGGAAAGGTCAAAATACATTTTCAGTGCATTGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
ATCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGACTTGCTTGAGGGGACTATTACAATAGACTCTAAAATAGGTCTTG
GGACATTCATCATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959