Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   RUL31_RS16430 Genome accession   NZ_CP135964
Coordinates   3333453..3335750 (-) Length   765 a.a.
NCBI ID   WP_277713830.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CD303     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3328453..3340750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUL31_RS16390 (RUL31_16390) - 3328924..3329355 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  RUL31_RS16395 (RUL31_16395) - 3329355..3329696 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  RUL31_RS16400 (RUL31_16400) - 3329689..3331170 (+) 1482 WP_061669364.1 Na+/H+ antiporter subunit D -
  RUL31_RS16405 (RUL31_16405) - 3331176..3331652 (+) 477 WP_094232698.1 Na+/H+ antiporter subunit E -
  RUL31_RS16410 (RUL31_16410) - 3331652..3331936 (+) 285 WP_094232699.1 Na(+)/H(+) antiporter subunit F1 -
  RUL31_RS16415 (RUL31_16415) mnhG 3331920..3332294 (+) 375 WP_061570550.1 monovalent cation/H(+) antiporter subunit G -
  RUL31_RS16420 (RUL31_16420) - 3332333..3332713 (-) 381 WP_010789785.1 hotdog fold thioesterase -
  RUL31_RS16425 (RUL31_16425) comA 3332731..3333372 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  RUL31_RS16430 (RUL31_16430) comP 3333453..3335750 (-) 2298 WP_277713830.1 histidine kinase Regulator
  RUL31_RS16435 (RUL31_16435) comX 3335761..3335925 (-) 165 WP_106046982.1 competence pheromone ComX -
  RUL31_RS16440 (RUL31_16440) - 3335938..3336798 (-) 861 WP_216412504.1 polyprenyl synthetase family protein -
  RUL31_RS16445 (RUL31_16445) degQ 3336982..3337125 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  RUL31_RS16450 (RUL31_16450) - 3337585..3337944 (+) 360 WP_315915881.1 hypothetical protein -
  RUL31_RS16455 (RUL31_16455) - 3337963..3339195 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88568.82 Da        Isoelectric Point: 7.8594

>NTDB_id=887846 RUL31_RS16430 WP_277713830.1 3333453..3335750(-) (comP) [Bacillus atrophaeus strain CD303]
MKAWHNKISILLILISLVYVGYLTYISSNKLLVGTTLEKNKANEAVITNIEEFSIAYDSGVQKGDVIKRINNHKLTSSFD
VQKNDLNHVSSLVVERDGKEIKINFDLMSGSNFSTLLIPLIFYIVCLFCCFFILKINESKKLLSALILIIFLLSASLAYV
SAGGSAKGDLLSRCIMVFTLTTVLLNYLLFLYQYFKELGTTLFNKKVFILYFISIFNVAFELLRENLFFGDYVPKLNLLT
FFILFIIVVVYFGVVLYKNKDTEQAHILKALTIINIISFSPFLCLYLIPYVFLNVQYVSSFVTASFMLLIPFSLVYQFMT
NKIYNVDFILSRLKYYGFLALTPTIILIVTFELLRRPEEDYHYIRLAVLIYIIMVAVFYYKEVLDFRFRLKRVSERFNYQ
DSIYKFTQLIRDSSSVKQVFGELKTTILEVTVVSRAHIYEVTFDRNIKPYEEVNLHSYHDTYQKQFSKVISEIGKIVEFN
NGFVMKIGERGGKSFVILCLSKMNTPRLTLEEISWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDLGLV
KALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDGVGFD
KEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=887846 RUL31_RS16430 WP_277713830.1 3333453..3335750(-) (comP) [Bacillus atrophaeus strain CD303]
ATGAAGGCATGGCACAATAAAATTTCAATTTTATTGATTTTAATTAGTTTAGTCTATGTAGGTTATTTAACGTATATTAG
TTCAAATAAACTATTAGTTGGAACAACTCTTGAAAAAAACAAAGCAAATGAAGCAGTAATAACAAATATAGAAGAATTTT
CTATTGCTTATGATTCTGGAGTGCAAAAAGGTGACGTTATAAAGCGTATAAATAATCATAAATTAACCAGTTCTTTTGAT
GTTCAAAAGAATGACTTAAATCACGTCAGTTCTTTGGTTGTCGAGCGAGATGGCAAAGAAATAAAAATTAATTTTGACTT
AATGAGCGGTAGTAATTTTTCCACTCTTCTAATTCCATTAATTTTTTATATAGTTTGTCTATTTTGCTGTTTCTTTATAT
TAAAAATAAATGAATCAAAAAAGTTGCTATCTGCTTTAATTTTAATCATTTTTCTTTTGTCTGCTTCTCTGGCATATGTA
AGTGCAGGAGGATCTGCTAAGGGAGATTTGTTAAGCAGATGCATTATGGTATTTACGTTAACAACTGTACTGCTTAACTA
TCTACTCTTTCTGTATCAATATTTTAAAGAGCTAGGCACTACATTATTTAACAAGAAAGTTTTCATTTTATATTTTATTT
CTATATTTAATGTAGCATTTGAACTGTTACGCGAGAATCTGTTTTTTGGGGATTATGTGCCTAAATTAAATCTACTTACT
TTTTTCATTTTATTTATAATAGTAGTTGTTTATTTTGGTGTCGTTTTATACAAGAATAAGGATACTGAACAAGCACATAT
TTTAAAGGCTCTTACAATAATTAATATCATTTCTTTTTCGCCATTTTTGTGTTTATATTTGATTCCTTATGTATTCTTAA
ATGTACAATATGTTTCTTCTTTTGTAACAGCTTCATTTATGCTGCTAATACCGTTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTAGATTTTATTTTGAGTAGATTAAAATATTATGGTTTTTTAGCATTAACACCTACAATTATTTT
AATTGTTACATTTGAGTTATTGAGAAGGCCAGAGGAAGACTACCATTATATTAGACTTGCGGTTTTGATATATATTATTA
TGGTGGCAGTTTTTTATTATAAGGAAGTACTTGATTTTAGATTTAGATTAAAGCGAGTTTCAGAAAGATTTAATTATCAA
GATAGTATATATAAATTTACACAACTTATTAGAGACTCTTCTTCTGTAAAGCAAGTATTTGGAGAACTGAAAACCACCAT
TCTTGAGGTTACAGTTGTAAGCCGAGCCCATATATATGAAGTTACATTTGATAGGAATATAAAACCATACGAGGAAGTAA
ACTTACATTCATATCATGATACCTATCAAAAACAATTTAGTAAAGTAATATCTGAAATTGGGAAAATTGTTGAATTTAAT
AACGGTTTTGTCATGAAGATAGGTGAGCGCGGGGGTAAATCATTTGTTATACTTTGCTTATCTAAAATGAATACTCCCCG
TCTCACGCTTGAAGAAATTTCTTGGCTTAAAACATTGGCTTTTTATACAAATGTCTCGATTGAAAACGTCATGAAAATTG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAATCCAGTCTGGCTCAAAAAACTGATGTATACTATC
GAAGAAAAACAACGATCTGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAAACGGCAATG
CGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAATGAATCAGC
AGATGTCTGATGTGATTTTGATGACAAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTGGGATTGGTA
AAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGAAGGTTTACAGC
ATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGCATTCCCAAG
CCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGCGTTGGCTTTGAT
AAAGAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGCATTAAAGAGCGGGTTCGTGCGTTAGACGGGCACCT
TCGGATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.642

100

0.561