Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   RUL31_RS02160 Genome accession   NZ_CP135964
Coordinates   440933..441052 (+) Length   39 a.a.
NCBI ID   WP_004430266.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CD303     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 435933..446052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUL31_RS02145 (RUL31_02145) - 437516..438202 (+) 687 WP_106045683.1 response regulator transcription factor -
  RUL31_RS02150 (RUL31_02150) - 438189..439607 (+) 1419 WP_315916375.1 HAMP domain-containing sensor histidine kinase -
  RUL31_RS02155 (RUL31_02155) rapC 439801..440949 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  RUL31_RS02160 (RUL31_02160) phrC 440933..441052 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  RUL31_RS02165 (RUL31_02165) - 441187..441294 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  RUL31_RS02170 (RUL31_02170) - 441498..441581 (-) 84 WP_370499808.1 YjcZ family sporulation protein -
  RUL31_RS02175 (RUL31_02175) - 441712..443076 (-) 1365 WP_315916376.1 aspartate kinase -
  RUL31_RS02180 (RUL31_02180) ceuB 443506..444456 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  RUL31_RS02185 (RUL31_02185) - 444449..445396 (+) 948 WP_106045687.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4111.89 Da        Isoelectric Point: 7.9858

>NTDB_id=887792 RUL31_RS02160 WP_004430266.1 440933..441052(+) (phrC) [Bacillus atrophaeus strain CD303]
MKLKSKLLIICLAAAAVFATVGVSNAEAPDYQVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=887792 RUL31_RS02160 WP_004430266.1 440933..441052(+) (phrC) [Bacillus atrophaeus strain CD303]
ATGAAATTGAAATCTAAATTGCTCATTATTTGTTTGGCTGCAGCTGCTGTGTTTGCAACAGTTGGAGTGTCCAATGCTGA
AGCGCCTGATTATCAGGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769