Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   RSK81_RS08635 Genome accession   NZ_CP135591
Coordinates   1753054..1754058 (-) Length   334 a.a.
NCBI ID   WP_002894913.1    Uniprot ID   A0A0B7GRU9
Organism   Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1748054..1759058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RSK81_RS08615 (RSK81_08615) - 1749198..1749596 (-) 399 WP_048774242.1 hypothetical protein -
  RSK81_RS08620 (RSK81_08620) - 1749933..1750415 (-) 483 WP_002909288.1 hypothetical protein -
  RSK81_RS08625 (RSK81_08625) - 1750487..1751809 (-) 1323 WP_002904960.1 glycosyltransferase family 4 protein -
  RSK81_RS08630 (RSK81_08630) - 1751811..1752809 (-) 999 WP_227969613.1 glycosyltransferase family 4 protein -
  RSK81_RS08635 (RSK81_08635) ccpA 1753054..1754058 (-) 1005 WP_002894913.1 catabolite control protein A Regulator
  RSK81_RS08640 (RSK81_08640) - 1754221..1755303 (+) 1083 WP_315686529.1 Xaa-Pro peptidase family protein -
  RSK81_RS08645 (RSK81_08645) - 1755733..1756779 (+) 1047 WP_315686531.1 iron ABC transporter permease -
  RSK81_RS08650 (RSK81_08650) - 1756781..1757536 (+) 756 WP_315686533.1 ABC transporter ATP-binding protein -
  RSK81_RS08655 (RSK81_08655) - 1757592..1758620 (+) 1029 WP_315686534.1 ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37010.05 Da        Isoelectric Point: 6.3717

>NTDB_id=887041 RSK81_RS08635 WP_002894913.1 1753054..1754058(-) (ccpA) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKDGLKNKKLSYSEGLVFESKYSYDDGYHLAERVIASK
ATAAFVTGDELAAGLLNGLSDQGIKVPEDFEIITSDDSQVARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHSISERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=887041 RSK81_RS08635 WP_002894913.1 1753054..1754058(-) (ccpA) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGAACACAGACGACACAGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCGATGGCGACAGTCAGTCGAGTAGT
GAATGGAAACAAGAACGTCAAAGAAAACACACGTAAAAAAGTTTTAGAGGTCATTGATCGTCTTGACTATCGTCCAAATG
CAGTGGCACGTGGATTAGCCAGCAAGAAGACTACAACCGTCGGCGTTGTCATTCCAAATATTACCAATAGTTATTTCTCA
ACCTTGGCAAAAGGGATTGACGATATTGCTGAAATGTATAAATACAACATTGTCTTGGCTAACAGTGATGAGGATGATGA
TAAGGAAGTATCCGTTGTCAATACGCTCTTTTCTAAGCAGGTGGATGGCATTATTTTCATGGGCTATCATCTGACGGAGA
AAATTCGCTCAGAGTTTTCACGTTCGCGTACACCGGTCGTTTTGGCGGGTACTGTCGATGTGGAGCATCAGCTTCCGAGC
GTCAATATTGACTACAAGCAAGCAACGGTTGATGCTGTAGAATTACTGGCTAAGCGCAATAAGAAAATTGCCTTTGTCAG
CGGACCGCTTGTTGATGATATCAACGGGAAAATCCGTCTATCAGGCTATAAAGATGGCTTGAAGAACAAGAAACTTTCAT
ACAGCGAAGGCTTGGTTTTTGAATCTAAATATTCTTATGATGATGGCTACCATTTGGCAGAGCGTGTCATTGCTTCCAAA
GCAACTGCGGCTTTTGTCACAGGAGATGAATTGGCAGCAGGCCTCTTAAATGGTCTGTCTGATCAAGGCATCAAGGTTCC
AGAAGATTTTGAAATCATTACCAGTGATGATTCACAAGTAGCTCGTTTCACTCGTCCTAACCTTTCCACAATCGGTCAGC
CCCTCTATGACATCGGCGCTATCAGTATGCGCATGCTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGCGAAGTT
CTCCTAGCTCACAGCATTAGCGAGCGTAAATCAACTCGGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7GRU9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.916

100

0.919

  ccpA Streptococcus pneumoniae D39

86.826

100

0.868

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.102

0.551