Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RRU92_RS04585 Genome accession   NZ_CP135436
Coordinates   932865..933596 (+) Length   243 a.a.
NCBI ID   WP_315640790.1    Uniprot ID   A0AA96MSA7
Organism   Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 927865..938596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRU92_RS04560 (RRU92_04560) - 929342..929974 (+) 633 WP_315640782.1 DJ-1/PfpI family protein -
  RRU92_RS04565 (RRU92_04565) dnaJ 930129..931265 (+) 1137 WP_049530135.1 molecular chaperone DnaJ -
  RRU92_RS04570 (RRU92_04570) - 931351..932004 (-) 654 WP_315640785.1 hypothetical protein -
  RRU92_RS04575 (RRU92_04575) - 932090..932377 (-) 288 WP_315640786.1 hypothetical protein -
  RRU92_RS04580 (RRU92_04580) - 932387..932797 (-) 411 WP_315640788.1 HIT family protein -
  RRU92_RS04585 (RRU92_04585) pptA 932865..933596 (+) 732 WP_315640790.1 ABC transporter ATP-binding protein Regulator
  RRU92_RS04590 (RRU92_04590) pptB 933593..934642 (+) 1050 WP_315640792.1 ABC transporter permease Regulator
  RRU92_RS04595 (RRU92_04595) - 934950..935279 (-) 330 WP_315640793.1 helicase BlpT -
  RRU92_RS04600 (RRU92_04600) - 935556..935894 (+) 339 WP_248034717.1 LytTR family DNA-binding domain-containing protein -
  RRU92_RS04605 (RRU92_04605) comE/blpR 935899..936636 (+) 738 WP_315640794.1 LytTR family DNA-binding domain-containing protein Regulator
  RRU92_RS04610 (RRU92_04610) - 936650..937990 (+) 1341 WP_315640795.1 sensor histidine kinase -
  RRU92_RS04615 (RRU92_04615) blpC 938270..938428 (-) 159 WP_248034714.1 quorum-sensing system pheromone BlpC -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27181.59 Da        Isoelectric Point: 4.7105

>NTDB_id=886535 RRU92_RS04585 WP_315640790.1 932865..933596(+) (pptA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEINIDGLTLGANPREYRQQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQNLAFERVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLDLEKKKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGDLEELREAFAMPQASLNDIYLALTKE
EDR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=886535 RRU92_RS04585 WP_315640790.1 932865..933596(+) (pptA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATGTTAGAAATTAAAAATCTGACAGGGGGCTATGTTCATGTCCCTGTCTTGAAAGATGTGTCCTTTACAGTCGAGAGTGG
ACAGTTGGTCGGTTTGATCGGTCTCAATGGTGCTGGAAAATCAACGACTATCAATGAAATTATTGGACTTTTGACACCTT
ATAGTGGAGAAATAAACATCGACGGGCTAACCTTAGGTGCCAATCCGCGAGAATATCGTCAGCAGATTGGTTACATTCCT
GAAACTCCTAGTTTGTACGAAGAATTAACTCTCAGAGAACATATCGAGACGGTTGCTATGGCCTATGGTATTGAGCAAAA
TCTAGCTTTTGAACGTGTAGAACCTCTTTTAAAAATGTTTCGTTTGGATCAGAAATTAGACTGGTTCCCAGTTCATTTTT
CAAAAGGGATGAAACAGAAGGTTATGATTATCTGTGCCTTTGTCGTGGATCCGAGTCTCTTTATCGTCGATGAACCCTTC
CTTGGTCTTGATCCCTTGGCCATTTCAGACTTGATCCAGCTTTTGGACCTTGAAAAGAAAAAAGGCAAGTCTATCCTCAT
GAGTACCCACGTTCTTGACTCTGCTGAAAAAATGTGTGATTCTTTTGTTATTCTTCACAAAGGGCAAGTGAGAGCTAAAG
GGGATCTTGAAGAACTGAGAGAAGCTTTTGCTATGCCTCAAGCAAGTCTAAACGATATTTACCTGGCTTTGACCAAAGAG
GAGGACCGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.274

99.177

0.737
  pptA Streptococcus thermophilus LMD-9

73.029

99.177

0.724