Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   RRU92_RS03985 Genome accession   NZ_CP135436
Coordinates   785079..786086 (+) Length   335 a.a.
NCBI ID   WP_248034848.1    Uniprot ID   -
Organism   Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 780079..791086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRU92_RS03960 (RRU92_03960) folP 780853..781803 (+) 951 WP_315640514.1 dihydropteroate synthase -
  RRU92_RS03965 (RRU92_03965) - 781805..783103 (+) 1299 WP_315640515.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  RRU92_RS03970 (RRU92_03970) folE 783105..783659 (+) 555 WP_000380917.1 GTP cyclohydrolase I FolE -
  RRU92_RS03975 (RRU92_03975) folK 783700..784524 (+) 825 WP_315640516.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  RRU92_RS03980 (RRU92_03980) - 784556..784873 (-) 318 WP_315640517.1 DUF960 domain-containing protein -
  RRU92_RS03985 (RRU92_03985) ccpA 785079..786086 (+) 1008 WP_248034848.1 catabolite control protein A Regulator
  RRU92_RS03990 (RRU92_03990) - 786390..787352 (-) 963 WP_315640532.1 asparaginase -
  RRU92_RS03995 (RRU92_03995) - 787418..788809 (+) 1392 WP_315640533.1 Cof-type HAD-IIB family hydrolase -
  RRU92_RS04000 (RRU92_04000) - 789029..789481 (-) 453 WP_049504821.1 universal stress protein -
  RRU92_RS04005 (RRU92_04005) - 789626..790465 (+) 840 WP_315640565.1 metallophosphoesterase family protein -
  RRU92_RS04010 (RRU92_04010) - 790537..790974 (+) 438 WP_045762642.1 Rrf2 family transcriptional regulator -

Sequence


Protein


Download         Length: 335 a.a.        Molecular weight: 37127.20 Da        Isoelectric Point: 5.9501

>NTDB_id=886532 RRU92_RS03985 WP_248034848.1 785079..786086(+) (ccpA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPDITNTYFS
ALAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGVIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKHATVDAVRHLLKRNKKIAFVSGPLVDDINGKIRLAGYKDALKEAGINYSEGLVFESKYRYDDGYALAERLISSK
ATAAIVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQIARYTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLVERHSTRKD

Nucleotide


Download         Length: 1008 bp        

>NTDB_id=886532 RRU92_RS03985 WP_248034848.1 785079..786086(+) (ccpA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATGAACACAGATGATACAGTAACAATTTATGACGTTGCCCGAGAAGCGGGAGTGTCAATGGCGACTGTCAGCCGTGTTGT
CAATGGCAATAAGAACGTCAAAGAAAACACCCGTAAAAAAGTCCTAGAGGTTATTGAACGTCTAGATTATCGTCCTAATG
CAGTAGCACGTGGTCTAGCAAGCAAGAAAACGACAACAGTTGGAGTCGTCATTCCAGATATCACAAATACTTATTTCTCT
GCCCTTGCTAAAGGGATTGACGATATCGCGGAGATGTACAAATACAACATCGTCCTTGCCAATAGTGATGAGGATGATGA
AAAGGAAGTATCTGTGGTCAATACTCTCTTTTCTAAACAGGTGGATGGCGTTATCTTCATGGGTTATCATTTAACTGAGA
AGATTCGCTCAGAGTTTTCACGCTCACGCACACCTGTCGTTCTTGCAGGAACAGTAGACGTAGAACACCAACTTCCAAGT
GTCAATATTGACTATAAACATGCTACAGTTGATGCAGTCCGTCATCTTTTGAAGCGAAACAAAAAAATTGCCTTCGTTAG
TGGACCATTAGTGGATGATATTAATGGCAAGATTCGCTTAGCTGGCTACAAAGATGCCTTAAAAGAAGCGGGAATCAACT
ACAGTGAAGGTCTTGTTTTCGAATCAAAATACCGTTATGACGATGGCTATGCCTTGGCAGAACGTTTGATTTCTTCTAAA
GCAACAGCAGCTATTGTAACAGGAGATGAACTGGCAGCAGGTGTGTTGAACGGACTTGCTGACAAGGGAGTTTCTGTACC
AGAAGACTTTGAAATTATCACCAGTGATGATTCGCAAATCGCGCGTTACACTCGTCCAAACCTAACCACCATTGCGCAAC
CTTTGTATGACCTCGGTGCTATTAGTATGCGTATGTTGACGAAGATTATGCATAAGGAAGAGTTAGAAGAGCGTGAAGTT
CTTTTGCCACATGGTTTGGTAGAACGTCATTCAACTCGTAAAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

90.419

99.701

0.901

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.323

99.701

0.881

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.61

98.806

0.579