Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   RQL82_RS15120 Genome accession   NZ_CP135159
Coordinates   3192160..3192564 (-) Length   134 a.a.
NCBI ID   WP_329759834.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AR3651     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3187160..3197564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL82_RS15090 (RQL82_15150) - 3187244..3187513 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  RQL82_RS15095 (RQL82_15155) rapZ 3187510..3188361 (-) 852 WP_002117179.1 RNase adapter RapZ -
  RQL82_RS15100 (RQL82_15160) panC 3188385..3189233 (-) 849 WP_329759831.1 pantoate--beta-alanine ligase -
  RQL82_RS15105 (RQL82_15165) panB 3189237..3190046 (-) 810 WP_002117298.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  RQL82_RS15110 (RQL82_15170) folK 3190092..3190574 (-) 483 WP_014208398.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  RQL82_RS15115 (RQL82_15175) pcnB 3190571..3192034 (-) 1464 WP_329759832.1 polynucleotide adenylyltransferase PcnB -
  RQL82_RS15120 (RQL82_15180) comEA 3192160..3192564 (-) 405 WP_329759834.1 ComEA family DNA-binding protein Machinery gene
  RQL82_RS15125 (RQL82_15185) mazG 3192533..3193339 (-) 807 WP_329759835.1 nucleoside triphosphate pyrophosphohydrolase -
  RQL82_RS15130 (RQL82_15190) - 3193452..3194225 (+) 774 WP_329759836.1 SDR family oxidoreductase -
  RQL82_RS15135 (RQL82_15195) relA 3194273..3196579 (-) 2307 WP_003655013.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 15417.67 Da        Isoelectric Point: 10.3474

>NTDB_id=885747 RQL82_RS15120 WP_329759834.1 3192160..3192564(-) (comEA) [Acinetobacter pittii strain AR3651]
MQLSMNLWKSKYYIFIVLFWSLISSTLIQAQSFDQNFKEWKAKQQMYDQKLSTQHSSHSNAPKSSIMTDSSGQVHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKTRLSL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=885747 RQL82_RS15120 WP_329759834.1 3192160..3192564(-) (comEA) [Acinetobacter pittii strain AR3651]
ATGCAGCTCAGCATGAATCTTTGGAAGAGTAAGTATTATATTTTTATTGTTTTATTTTGGAGCCTGATTTCATCGACACT
GATTCAGGCCCAATCTTTCGATCAAAATTTTAAGGAGTGGAAAGCTAAACAGCAGATGTATGATCAGAAGTTAAGCACGC
AGCATTCCTCTCATTCTAATGCCCCAAAAAGTTCAATAATGACTGATTCTTCAGGGCAGGTGCACTTGAATCAAGCCAAT
ATTGATGAGCTTCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCGATTGTAGAATACCGTCAAAAGAATGGTGG
TTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGTATTGGTCCAGCCATTTTTGAAAAGAATAAAACGCGGTTGAGTT
TATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(71-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

69.343

100

0.709
  comEA Acinetobacter baumannii D1279779

67.883

100

0.694
  comEA Acinetobacter baylyi ADP1

41.935

92.537

0.388