Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RQL82_RS03260 Genome accession   NZ_CP135159
Coordinates   667044..667427 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AR3651     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 662044..672427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL82_RS03250 (RQL82_03255) nolF 664944..666053 (-) 1110 WP_202724690.1 efflux RND transporter periplasmic adaptor subunit -
  RQL82_RS03255 (RQL82_03260) - 666122..666760 (-) 639 WP_320562074.1 hypothetical protein -
  RQL82_RS03260 (RQL82_03265) pilG 667044..667427 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  RQL82_RS03265 (RQL82_03270) pilH 667450..667812 (+) 363 WP_002116220.1 response regulator -
  RQL82_RS03270 (RQL82_03275) pilI 667873..668409 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  RQL82_RS03275 (RQL82_03280) pilJ 668452..670530 (+) 2079 WP_262728206.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=885734 RQL82_RS03260 WP_000389061.1 667044..667427(+) (pilG) [Acinetobacter pittii strain AR3651]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=885734 RQL82_RS03260 WP_000389061.1 667044..667427(+) (pilG) [Acinetobacter pittii strain AR3651]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37