Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   RQL82_RS01655 Genome accession   NZ_CP135159
Coordinates   350087..350896 (+) Length   269 a.a.
NCBI ID   WP_002117088.1    Uniprot ID   A0A013UCU5
Organism   Acinetobacter pittii strain AR3651     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 345087..355896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL82_RS01620 (RQL82_01625) - 345655..345800 (-) 146 Protein_310 hypothetical protein -
  RQL82_RS01625 (RQL82_01630) rpoZ 345839..346117 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  RQL82_RS01630 (RQL82_01635) gmk 346190..346819 (-) 630 WP_002116973.1 guanylate kinase -
  RQL82_RS01635 (RQL82_01640) ispH 346942..347892 (+) 951 WP_002116992.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  RQL82_RS01640 (RQL82_01645) fimU 348062..348535 (+) 474 WP_284090635.1 pilus assembly FimT family protein Machinery gene
  RQL82_RS01645 (RQL82_01650) pilV 348529..349089 (+) 561 WP_202744830.1 type IV pilus modification protein PilV Machinery gene
  RQL82_RS01650 (RQL82_01655) pilW 349089..350090 (+) 1002 WP_284090634.1 PilW family protein Machinery gene
  RQL82_RS01655 (RQL82_01660) pilX 350087..350896 (+) 810 WP_002117088.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  RQL82_RS01660 (RQL82_01665) pilY1 350908..354762 (+) 3855 WP_329760176.1 PilC/PilY family type IV pilus protein Machinery gene
  RQL82_RS01665 (RQL82_01670) pilY2 354773..355255 (+) 483 WP_284090631.1 type IV pilin protein Machinery gene
  RQL82_RS01670 (RQL82_01675) pilE 355252..355677 (+) 426 WP_005078455.1 type IV pilin protein Machinery gene

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 28518.31 Da        Isoelectric Point: 7.2645

>NTDB_id=885727 RQL82_RS01655 WP_002117088.1 350087..350896(+) (pilX) [Acinetobacter pittii strain AR3651]
MTHLIHKSRSKEKGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVSQLNFQSSDTPLELIVQMNPTTLTNITNVI
GAALKEHESNPGAEYNFCYKPVSTATNFAQTRGASLLRAGSANNAVVEDGGVAGFCDLTSDYGSNRQAVVTQVAVSVPTD
AASDIPGSNLPRGTNTSEGTQLPKSMLSTQRIRVITTAFLPAYASTSIETLQRDCLSTSSAKISDNFDTALTAKQTLAEC
LANHNVPFSTQVQEFNYTNKLTQITAPGS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=885727 RQL82_RS01655 WP_002117088.1 350087..350896(+) (pilX) [Acinetobacter pittii strain AR3651]
ATGACCCATTTAATTCATAAGAGTAGATCTAAGGAAAAAGGGGCAACCCTTATTGTTGTGCTTATTATTTTATTGATTGT
TATTTCTGTAGGCGTTTTAGCAATAAGAGTGGCTATTGTTTCTTTAAAAGTTGCTACCAATAGCCAAGTTAGCCAATTAA
ATTTTCAGTCATCTGACACTCCTTTAGAACTCATTGTGCAGATGAATCCTACCACCCTAACTAATATTACTAATGTGATT
GGTGCCGCGCTTAAAGAGCATGAAAGTAATCCCGGTGCAGAATACAACTTTTGTTATAAGCCTGTTTCTACAGCAACAAA
TTTTGCTCAGACCAGAGGTGCAAGTTTACTTCGAGCAGGAAGCGCTAATAATGCAGTCGTTGAAGATGGCGGCGTGGCGG
GTTTCTGCGATTTAACAAGTGACTATGGTAGTAATCGTCAAGCAGTGGTTACCCAAGTTGCTGTAAGTGTTCCAACAGAT
GCTGCTAGCGATATTCCAGGCTCAAATTTACCACGAGGAACAAACACCTCGGAAGGTACGCAACTACCTAAAAGCATGTT
GTCTACACAACGTATTCGAGTGATTACAACTGCTTTTTTGCCAGCCTATGCATCTACCTCTATTGAAACTTTACAAAGAG
ATTGCTTAAGCACGAGTTCGGCAAAAATTAGCGACAATTTTGATACCGCATTAACAGCTAAACAAACATTGGCGGAGTGT
TTGGCAAATCATAACGTGCCTTTTAGTACTCAAGTTCAAGAATTTAACTATACCAATAAACTCACTCAAATTACGGCACC
AGGTTCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A013UCU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Acinetobacter baumannii D1279779

90.441

100

0.914