Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   RQL82_RS01525 Genome accession   NZ_CP135159
Coordinates   322784..323311 (+) Length   175 a.a.
NCBI ID   WP_017481730.1    Uniprot ID   A0A010ITU2
Organism   Acinetobacter pittii strain AR3651     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 317784..328311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL82_RS01510 (RQL82_01515) pilM 320297..321355 (+) 1059 WP_005067078.1 pilus assembly protein PilM Machinery gene
  RQL82_RS01515 (RQL82_01520) pilN 321355..321996 (+) 642 WP_032004890.1 PilN domain-containing protein Machinery gene
  RQL82_RS01520 (RQL82_01525) pilO 321993..322772 (+) 780 WP_039765193.1 type 4a pilus biogenesis protein PilO Machinery gene
  RQL82_RS01525 (RQL82_01530) pilP 322784..323311 (+) 528 WP_017481730.1 pilus assembly protein PilP Machinery gene
  RQL82_RS01530 (RQL82_01535) pilQ 323374..325500 (+) 2127 WP_039765195.1 type IV pilus secretin PilQ Machinery gene
  RQL82_RS01535 (RQL82_01540) aroK 325512..326081 (+) 570 WP_039765198.1 shikimate kinase AroK -
  RQL82_RS01540 (RQL82_01545) aroB 326110..327192 (+) 1083 WP_005067096.1 3-dehydroquinate synthase -
  RQL82_RS01545 (RQL82_01550) - 327209..328078 (+) 870 WP_068526914.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19253.42 Da        Isoelectric Point: 9.7299

>NTDB_id=885721 RQL82_RS01525 WP_017481730.1 322784..323311(+) (pilP) [Acinetobacter pittii strain AR3651]
MKLKKILLSLGIGLVLVGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=885721 RQL82_RS01525 WP_017481730.1 322784..323311(+) (pilP) [Acinetobacter pittii strain AR3651]
ATGAAACTAAAGAAAATTTTACTTTCTCTGGGGATAGGCTTAGTTTTGGTTGGATGCGACTCTAGAATCGACGCCGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCGGCACCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTGAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A010ITU2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

88

100

0.88
  comL Acinetobacter baylyi ADP1

73.964

96.571

0.714