Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | OCUAc18_RS17225 | Genome accession | NZ_AP024802 |
| Coordinates | 3547900..3548373 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214064.1 | Uniprot ID | A0A0J8UYN3 |
| Organism | Acinetobacter baumannii strain OCU Ac18 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3542900..3553373
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCUAc18_RS17210 (OCUAc18_33730) | pilX | 3545529..3546347 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| OCUAc18_RS17215 (OCUAc18_33740) | pilW | 3546344..3547345 (-) | 1002 | WP_000079193.1 | PilW family protein | Machinery gene |
| OCUAc18_RS17220 (OCUAc18_33750) | pilV | 3547346..3547906 (-) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| OCUAc18_RS17225 (OCUAc18_33760) | fimU | 3547900..3548373 (-) | 474 | WP_001214064.1 | GspH/FimT family pseudopilin | Machinery gene |
| OCUAc18_RS17230 (OCUAc18_33770) | ispH | 3548543..3549493 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| OCUAc18_RS17235 (OCUAc18_33780) | gmk | 3549616..3550245 (+) | 630 | WP_000015939.1 | guanylate kinase | - |
| OCUAc18_RS17240 (OCUAc18_33790) | rpoZ | 3550318..3550596 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| OCUAc18_RS17245 | - | 3550635..3550765 (+) | 131 | Protein_3378 | hypothetical protein | - |
| OCUAc18_RS17250 (OCUAc18_33800) | - | 3550805..3552910 (+) | 2106 | WP_001117590.1 | HD domain-containing protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16850.43 Da Isoelectric Point: 8.5355
>NTDB_id=88572 OCUAc18_RS17225 WP_001214064.1 3547900..3548373(-) (fimU) [Acinetobacter baumannii strain OCU Ac18]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=88572 OCUAc18_RS17225 WP_001214064.1 3547900..3548373(-) (fimU) [Acinetobacter baumannii strain OCU Ac18]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |