Detailed information NTG0088570

Bioinformatically predicted

Overview

• Name: pilW
• Type: Machinery gene
• Locus tag: OCUAc18_RS17215
• Genome accession: NZ_AP024802
• Coordinates: 3546344..3547345 (-)
• Length: 333 a.a.
• NCBI ID: WP_000079193.1
• Uniprot ID: A0A3R9TLC9
• Organism: Acinetobacter baumannii strain OCU Ac18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3541344..3552345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCUAc18_RS17205 (OCUAc18_33720)	pilY1	3541663..3545517 (-)	3855	WP_000768940.1	PilC/PilY family type IV pilus protein	Machinery gene
OCUAc18_RS17210 (OCUAc18_33730)	pilX	3545529..3546347 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
OCUAc18_RS17215 (OCUAc18_33740)	pilW	3546344..3547345 (-)	1002	WP_000079193.1	PilW family protein	Machinery gene
OCUAc18_RS17220 (OCUAc18_33750)	pilV	3547346..3547906 (-)	561	WP_085916952.1	type IV pilus modification protein PilV	Machinery gene
OCUAc18_RS17225 (OCUAc18_33760)	fimU	3547900..3548373 (-)	474	WP_001214064.1	GspH/FimT family pseudopilin	Machinery gene
OCUAc18_RS17230 (OCUAc18_33770)	ispH	3548543..3549493 (-)	951	WP_000407064.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
OCUAc18_RS17235 (OCUAc18_33780)	gmk	3549616..3550245 (+)	630	WP_000015939.1	guanylate kinase	-
OCUAc18_RS17240 (OCUAc18_33790)	rpoZ	3550318..3550596 (+)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
OCUAc18_RS17245	-	3550635..3550765 (+)	131	Protein_3378	hypothetical protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 35771.45 Da
• Isoelectric Point: 5.9994

>NTDB_id=88570 OCUAc18_RS17215 WP_000079193.1 3546344..3547345(-) (pilW) [Acinetobacter baumannii strain OCU Ac18]
MAQSFISNKEQGFTLIELIVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGLEYMARDIRLLNYGNVVNPQL
TDTTPWGGIVLTGSTATNANNINFIPKVDTNTYIPEALLSHGAGDTVSTVNNHWKGLSNIQNSSNAEVQSDQLTIQFIAP
TNMTNCEGVNVLAGDLIVQRYFLRVDNNGSSQQDYALACDANTPAVSATAQPDIVNGLGDAGQIILPRIDHFHVLLGAKN
AAGNFAYYTIPQYRVAAQAARDASPAVAAPRILSIQISVLARSTNNAQNKAIDPNQSFLMLDQTVHAADNRTRFLRRVYS
VTIALRNAMGETL

Nucleotide

• Length: 1002 bp

>NTDB_id=88570 OCUAc18_RS17215 WP_000079193.1 3546344..3547345(-) (pilW) [Acinetobacter baumannii strain OCU Ac18]
ATGGCTCAATCATTTATTTCTAATAAAGAACAAGGTTTTACCTTGATTGAACTTATAGTCGCCTTAGCTTTAGGCCTAAT
ATTAGTGGCTGCTGCAACACAGCTATTTATTGGAGGGCTTTTATCGAGCCGATTGCAAAAGGCCAATGCTGAAATCCAGG
ACAGCGGTATTTTTGGTTTGGAATATATGGCACGTGATATACGGCTTCTAAATTATGGAAATGTTGTAAATCCACAATTA
ACAGATACAACGCCTTGGGGAGGTATTGTATTAACAGGTTCAACAGCAACAAATGCCAACAATATTAATTTTATTCCAAA
AGTTGATACAAATACTTATATTCCGGAAGCGTTATTAAGCCATGGTGCAGGTGATACTGTAAGTACAGTGAATAACCACT
GGAAAGGTCTTTCAAATATACAGAATAGTTCAAATGCTGAAGTACAAAGCGATCAGCTGACTATTCAATTCATTGCCCCG
ACCAATATGACTAATTGTGAAGGTGTGAATGTGTTAGCGGGGGACCTAATAGTTCAACGGTATTTTTTACGTGTTGATAA
TAATGGTAGTTCTCAACAGGATTATGCACTTGCATGTGATGCGAATACCCCTGCGGTTAGTGCTACAGCTCAACCTGATA
TCGTTAATGGATTAGGAGATGCAGGGCAAATTATACTGCCTCGTATTGACCATTTTCATGTCTTATTAGGTGCGAAAAAC
GCAGCTGGTAATTTTGCTTATTACACAATTCCTCAGTATCGGGTGGCTGCACAAGCTGCTCGAGATGCGAGTCCAGCTGT
GGCTGCTCCAAGAATTCTGTCAATACAAATATCGGTATTAGCCCGTTCTACAAATAATGCTCAAAATAAGGCAATAGACC
CTAATCAGTCTTTTCTTATGCTAGATCAGACTGTGCATGCTGCCGATAACAGAACTCGCTTTTTGCGACGCGTATATAGC
GTGACAATTGCTTTACGCAATGCAATGGGGGAAACACTATGA

Domains

Predicted by InterproScan.

• Type IV Pilus-assembly protein W (PilW) (181-327)

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

3D structure

• AlphaFold DB: A0A3R9TLC9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilW	Acinetobacter baumannii D1279779	99.099	100	0.991