Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   RQL83_RS04635 Genome accession   NZ_CP135151
Coordinates   974061..976493 (+) Length   810 a.a.
NCBI ID   WP_002118905.1    Uniprot ID   A0A009N350
Organism   Acinetobacter pittii strain AR3676     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 969061..981493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL83_RS04605 (RQL83_04620) - 969211..970152 (-) 942 WP_002118998.1 hypothetical protein -
  RQL83_RS04610 (RQL83_04625) - 970399..970887 (+) 489 WP_078210287.1 YaiI/YqxD family protein -
  RQL83_RS04615 (RQL83_04630) - 970895..971803 (+) 909 WP_002118971.1 DMT family transporter -
  RQL83_RS04620 (RQL83_04635) - 971833..971934 (-) 102 Protein_887 PilZ domain-containing protein -
  RQL83_RS04625 (RQL83_04640) lolC 972063..973298 (+) 1236 WP_004790618.1 lipoprotein-releasing ABC transporter permease subunit -
  RQL83_RS04630 (RQL83_04645) lolD 973291..973977 (+) 687 WP_002118798.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  RQL83_RS04635 (RQL83_04650) comA/comEC 974061..976493 (+) 2433 WP_002118905.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  RQL83_RS04640 (RQL83_04655) - 976446..977429 (-) 984 WP_002118440.1 lysophospholipid acyltransferase family protein -
  RQL83_RS04645 (RQL83_04660) sppA 977563..978579 (+) 1017 WP_002118954.1 signal peptide peptidase SppA -
  RQL83_RS04650 (RQL83_04665) - 978603..979403 (+) 801 WP_002118584.1 alpha/beta fold hydrolase -
  RQL83_RS04655 (RQL83_04670) purN 979481..980110 (-) 630 WP_002118669.1 phosphoribosylglycinamide formyltransferase -
  RQL83_RS04660 (RQL83_04675) purM 980107..981177 (-) 1071 WP_002118876.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92852.37 Da        Isoelectric Point: 8.9137

>NTDB_id=885688 RQL83_RS04635 WP_002118905.1 974061..976493(+) (comA/comEC) [Acinetobacter pittii strain AR3676]
MLKLILMGWIGGIAFMGIDIPLIMQYGWLGKVLLVMGFIFYIFKRNIFLNRPILKTIYCLVCAISLFTIGHQYAQHALNQ
RLELRQMQPKSLDIIVYVDRISDEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVNSAIDEPKLKLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSGFSVQHIEPLSSDEIYQLGYQHHLKEQQKFFNRQKLNVEKLRLTFRLMLKQSTLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWVLHQLIRRYYPQLYLHQPKQIWTMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFAFLVLIKVAVKPFSLLVYSASLLLLFDPFSALSAGFWLSYGSCFILLRIYQTIEQAPNLVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQITWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQISD
VLISIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSLQIQLNIIDVGQGQ
SIFLQHPQQTWLIDTGGSYDEKAFSIGRNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQTFPIKQVISNELWKEQ
ITEPFTYCHQGQKWQYPQLDIEILWPKEKDLNLVSTNQNQYSCVIYIHLKQINDYQNYLIMGDAGLEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARIQELNIPFKSTVEQGTLSFVSRNQEMVLYTRR
FERTWLHRNL

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=885688 RQL83_RS04635 WP_002118905.1 974061..976493(+) (comA/comEC) [Acinetobacter pittii strain AR3676]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTTTAATAATGCAATATGG
GTGGTTAGGTAAAGTCTTGCTTGTTATGGGTTTTATTTTTTATATTTTTAAGAGAAATATTTTCTTAAATCGCCCCATAT
TAAAAACCATTTACTGTCTAGTCTGTGCTATTAGTCTCTTTACTATAGGACATCAATATGCTCAGCATGCCTTAAATCAA
AGATTAGAACTGCGACAAATGCAGCCTAAATCTTTAGATATTATTGTGTATGTCGACCGTATAAGTGACGAAAAAGAAGA
TAAGACACAGCAACCCGTTCAGGTATTAGGGCAGTCCTTACATCCCGTTAATTGGCTATTATATTTAAAAAATCAAAAAG
TAAACTCAGCCATAGATGAGCCAAAATTAAAATTAGGTCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TATGCAGTGGCTGGTGTTTTTGACCAAGAACAGTGGTTCATTCAACGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAATTTATCAGTTGGGTTATCAACATCATTTAAAAGAGCAACAGAAATTCTTTAACAGAC
AAAAATTAAATGTAGAAAAGTTGCGCCTAACGTTTAGATTAATGTTAAAACAATCTACTTTGCAAAATAAAGGACTGTTA
TTAGCTTTATTAACAGGGGATGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATCT
GTTAGCCATTTCAGGGCCTCATGTACTCATTTTTGCTATCATGTTGTCTTGGGTATTACATCAATTAATAAGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGACCATGATTCCATTATGTTTCGGTGTTTTAATTTATACGGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTCTCAGTATTTTTATTTGCTTTTTTGGTATTGATTAAAGTGGC
TGTTAAACCATTTTCACTCTTGGTTTATAGCGCAAGTCTACTTTTACTTTTCGATCCCTTCAGTGCTTTATCCGCAGGTT
TTTGGCTGTCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATCTTGTTTCAACT
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCTCT
AATGTTGATTTTCTTTCAACAGATTACATGGGTTGCTCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAGTGAC
GTCCTGATTAGTATAGTACTGTCATGTTTTAATCTTTTAGAAAAGTTATCTCTACCATTACAAGGTTTTAGCCTCACACC
ACTTGATTTAGTGTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCCAAATCTTGGGGGCTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCGTCCCTGCAAATTCAATTAAATATTATAGATGTAGGACAGGGGCAA
TCTATATTCTTACAGCACCCGCAGCAGACATGGCTCATCGATACGGGTGGGTCTTATGACGAGAAAGCTTTTAGTATTGG
TCGAAATGTGGTGATTCCATATTTACGCCAAAAGGGAATTAAACAACTGGATCACGTCGTACTATCTCATCTTGATCAAG
ATCATAGCGGAGCATTTCCTTCTATTGCTCAGACTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGAAAGAGCAA
ATTACAGAACCATTTACTTATTGTCATCAAGGGCAAAAATGGCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTACAAATCAAAATCAATATTCTTGTGTGATTTATATTCATTTAAAACAGATAAATG
ACTATCAAAATTATTTAATCATGGGCGATGCAGGGTTGGAAGCAGAATATCAACTCATGAAAGAATATCCTGATTTAAAG
GTGGATGTCTTGGTATTAGGTCATCATGGAAGTAAACATAGTTCAGCTTACGACTTCTTAGCGACGTTAAACCCCAAGCT
TGTTGTTGCTTCTGCTGGCTTTAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAATACAAGAGCTTAATA
TTCCATTTAAAAGCACAGTTGAGCAAGGAACATTGAGTTTTGTATCTCGCAATCAAGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGAATTTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009N350

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

68.85

99.877

0.688

  comA/comEC Acinetobacter baumannii strain A118

68.232

99.877

0.681

  comA/comEC Acinetobacter baylyi ADP1

48.708

100

0.489